Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09128 ATGTTGTCTATCTTTCGGCAATACACCTTTGATGACTCATTTGAACAAGTATTCGTCTCAAGTAAATTCCTGAAGGAATTCCAGATTGCTCTCACCTTCGCCACAGACTATGATGAGCATTGTGTTCCCACAAATGGAGTGTTCAGACCCACCTGGGACATTACAAAAGTCACCCCCGATTCAATCACTCGGTTTAAGAAGGATCACCCTGACGTGAATGTCAAAGTGTACATCAGCATTGGCAATCGTGGCACTGAATTTCCCTTTTGTCCCCAAGAGAACAAGTCATGGATCGCCAATGCCACCGAATCGCTCACAAGCATCATAAAAAATGAAGACTACAACCTCCAAGTGGATGGCATTGATGTCTTGTATGAGCACATCGAGTCCTCACCCAAGGACTTTGTCGAGTGCGTGGGACAGGTTATAAAGAACTTGAAGGAGGGTGGAGTGATTAGAGAAGCTTCCATTTCTCCATCCTTTGCTCTCAACGAAGAATTTTATCTCACCTTGTATAACAGTTATCCTTTCCTCATCGACTGGGTCGATTACCAGTTCCAAAATGAGGTTACTCCTGTGTTTGCGCCCAATACCTTGTTGGAGCGCTACAATAAATTAGTTGCCAACTTTTATCCAAGAAGAAAGCTCTTTGCTGGATACAGTGCCGAGAACGAGGATTGGGCTACATTGTCACCGATTGTGTTCTTTTTGGGAGGCATGGACATTCTGAAGAAGAGAAGAGGTCCTGGTATCTCCATTCATTATCATAATTACTATAAGCCATTTGAAAGAAACTCCATATAA 804 0.4316 MLSIFRQYTFDDSFEQVFVSSKFLKEFQIALTFATDYDEHCVPTNGVFRPTWDITKVTPDSITRFKKDHPDVNVKVYISIGNRGTEFPFCPQENKSWIANATESLTSIIKNEDYNLQVDGIDVLYEHIESSPKDFVECVGQVIKNLKEGGVIREASISPSFALNEEFYLTLYNSYPFLIDWVDYQFQNEVTPVFAPNTLLERYNKLVANFYPRRKLFAGYSAENEDWATLSPIVFFLGGMDILKKRRGPGISIHYHNYYKPFERNSI. 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09128 267 PRINTS 2-S globulin family signature 19 38 IPR000677 -
Seca4g09128 267 PRINTS 2-S globulin family signature 45 60 IPR000677 -
Seca4g09128 267 PRINTS 2-S globulin family signature 177 200 IPR000677 -
Seca4g09128 267 PRINTS 2-S globulin family signature 103 125 IPR000677 -
Seca4g09128 267 PRINTS 2-S globulin family signature 62 80 IPR000677 -
Seca4g09128 267 PANTHER CHITINASE 2-LIKE 4 257 - -
Seca4g09128 267 Gene3D Glycosidases 2 265 - -
Seca4g09128 267 Pfam Glycosyl hydrolases family 18 62 232 IPR001223 GO:0005975
Seca4g09128 267 SUPERFAMILY (Trans)glycosidases 26 253 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09128 Seca-Chr4 216656910 216659335 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09128 - - tpra:123898390 436.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g09128 4 216656910 216659335 Seca4g09128 4 216656910 216659335 ECH
Seca4g09128 4 216656910 216659335 Seca4g09129 4 216663386 216664300 PCT