Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09066 ATGTCACTCATGTTGAACAAAAACAACAGCACCAAAATGGGGACGCCTTTGTTCCAAGAATTTAAGAAGCAAGCTTCTTTCTTCCTCAAGGAGAAATTCAAGACTGCTAGATTAGCTCTCACTGATGTTACCCCTGCTGAACTGATGACAGAAGAGGCTACAAATGGAAATCCATGGGCCCCAGATTCCCCAACACTCAGATCAATTTCAAAGGCTGCTTTTGAGCTAGATGATTATTGGAGGATTGTAGAGATTCTGCATAAAAGACTGGTTAAATTTGACAAGAAGAATTGGAGGACCTCTTACAATTCTCTGATTGTGCTTGAGCACCTATTGACTCATGGACCTGAAAGTATTGCACAAGAATTTCAGAGTGACAAAGATGCTATTAGTCAGATGATAAACTTTCAGTATATTGATGATAGTGGGTTCAACTGGGGCCTAACTGTCAGAAAGAAATCAGAGAGAATATTGAAACTGCTGGAAGAAGGAACTGTACTTAAGGAAGAAAGAGACCGTGCTCGGAGGTTGTCTAGGGGAATTCAAGGTTTTGGAAGTTTCTGCCATAGGTCAACTCCAGAACATGGCATTCTGCGGGAAAAATCTTTTCCAACAACATTTGGCCGATGTAACTCTGACTTCAACAACCATGAAAATCAAGAAAACCAGTCCTCTTTCTCAAACCATTATTTGGACACAGCAGCAGTTGTTAAATCTCCTAGTCCTGGTCATCAAGAGGAAATTTTCAAGTCAGTGGATAATGAAGAAACTGAAAGCTACCTGGATGATCTGGGTAACGATCAAATGCTTCATAAATCTGAAACAAGCTCTAAAGAAAACATGACACCTGGCAAGGAGGAATTGCATCTATGGAACTTGAAAGGGGAGTCCAATCCACTTTTGGATGGTAGCCAAGAGGATTCCAGAGTTCAAGCTTTGATAGCAGAAGAGGATCACCCCTTTAACTCAACAGAAATGCAAGCCGATTCTTCCCTTCTTTCTTCTAGAGGATAA 1014 0.4093 MSLMLNKNNSTKMGTPLFQEFKKQASFFLKEKFKTARLALTDVTPAELMTEEATNGNPWAPDSPTLRSISKAAFELDDYWRIVEILHKRLVKFDKKNWRTSYNSLIVLEHLLTHGPESIAQEFQSDKDAISQMINFQYIDDSGFNWGLTVRKKSERILKLLEEGTVLKEERDRARRLSRGIQGFGSFCHRSTPEHGILREKSFPTTFGRCNSDFNNHENQENQSSFSNHYLDTAAVVKSPSPGHQEEIFKSVDNEETESYLDDLGNDQMLHKSETSSKENMTPGKEELHLWNLKGESNPLLDGSQEDSRVQALIAEEDHPFNSTEMQADSSLLSSRG. 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09066 337 Pfam ENTH domain 44 164 IPR013809 -
Seca4g09066 337 ProSiteProfiles ENTH domain profile. 38 171 IPR013809 -
Seca4g09066 337 SUPERFAMILY ENTH/VHS domain 24 171 IPR008942 -
Seca4g09066 337 Gene3D - 38 184 IPR008942 -
Seca4g09066 337 CDD ENTH 46 162 - -
Seca4g09066 337 PANTHER EPSIN/ENT-RELATED 22 261 - -
Seca4g09066 337 SMART enth_2 44 171 IPR013809 -
Seca4g09066 337 MobiDBLite consensus disorder prediction 316 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09066 Seca-Chr4 215573876 215576039 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09066 K12471 - gmx:100812797 516.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03884 4 68303633 68305689 Seca4g09066 4 215573876 215576039 PCT