Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03884 ATGGGCACTCCTTTGTTCCATGAATTCAAAAAGCAAGCTTCTTTCTTCCTCAAGGAGAAAATCAAGACTGCTAGATTAGCTCTAACAGATGTCACTCCTGCAGAACTGAAGACAGAAGAGGCAACCAGTGGAAATCCATGGTCCCCAGATTCCCCAACACTAAGAGCAATCTCAAAGGCTGCTTTTGAGCTAGATGATTATTGGAGGATTGTTGAGATTCTGCATAAAAGACTAGTTAAATTTGAAAAGAAGAATTGGAGGGCCTCTTACAATTCCCTGATTGTGCTTGAGCACCTGTTGACACATGGACCAGAAAGTGTAGCTGAGGAATTTCAGAGTGATAAAGATGTTATTGGCCAGCTGAAAGGCTTTCAGTATATTGATGAGAATGGGTATGCGTTTTTTTTTTCTTTACAATTTTTAACCGAAAATCTCTGCACTTTGATTTTCTTCCTCTTGACACTGGTACTGCTACAAGATCATGAGTATATGTTGAGAATTTGCAGGTTCAATTGGGGCCTAACTGTGAGAAAGAAATCAGAGCGGGTAATGAAACTGCTGGAAGAAGGAACTCTTCTCAAGGAAGAGAGAAACCATGCTAGAAGGTTATCCAGAGGAATTCAAGGTTTTGGAAGTTTCCCTAAACGGACAACTCCAGCACAAGGAATTCTACGAGAGAAATCATTGCCAACCACAATTGACAGATGTGACTCAGACTTCAACAACCATGAAGATCAGGAAAACCAATCCTCTTGCTCAAACAAGGGTGTGGACACAGTAGCTGTTAAATCTCCTAGCCATCAAAGAGAAATTTTCAAGTCAACGGATGGTGTGGAAACCAAGAAATTAATGGATGATCTTGGTAACAATCAAATGTTTCAGAAATCTGAAACAAGTTCTAAAGAAAACAAGGAACCAAGCAGGGAGGAATTCCATTTGTGGAGCTTGAAAGGGGAGTCCAAACCACTTTTGGATTGTGGAGAAGAGGATTCCAGGGTTGGGATCTTCAGAACAGAAAATGATCACCCCTTTAATTCAACAACTGAAATGCATGCCACAGCCTCCCTGATTTCTGCTAGAGATGGAATACTACAAGGGTGTTGA 1104 0.4094 MGTPLFHEFKKQASFFLKEKIKTARLALTDVTPAELKTEEATSGNPWSPDSPTLRAISKAAFELDDYWRIVEILHKRLVKFEKKNWRASYNSLIVLEHLLTHGPESVAEEFQSDKDVIGQLKGFQYIDENGYAFFFSLQFLTENLCTLIFFLLTLVLLQDHEYMLRICRFNWGLTVRKKSERVMKLLEEGTLLKEERNHARRLSRGIQGFGSFPKRTTPAQGILREKSLPTTIDRCDSDFNNHEDQENQSSCSNKGVDTVAVKSPSHQREIFKSTDGVETKKLMDDLGNNQMFQKSETSSKENKEPSREEFHLWSLKGESKPLLDCGEEDSRVGIFRTENDHPFNSTTEMHATASLISARDGILQGC. 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03884 367 MobiDBLite consensus disorder prediction 288 308 - -
Seca4g03884 367 ProSiteProfiles ENTH domain profile. 26 197 IPR013809 -
Seca4g03884 367 Gene3D - 26 210 IPR008942 -
Seca4g03884 367 CDD ENTH 34 188 - -
Seca4g03884 367 SUPERFAMILY ENTH/VHS domain 12 149 IPR008942 -
Seca4g03884 367 PANTHER EPSIN/ENT-RELATED 170 306 - -
Seca4g03884 367 Pfam ENTH domain 32 148 IPR013809 -
Seca4g03884 367 SUPERFAMILY ENTH/VHS domain 158 211 IPR008942 -
Seca4g03884 367 SMART enth_2 32 197 IPR013809 -
Seca4g03884 367 MobiDBLite consensus disorder prediction 237 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03884 Seca-Chr4 68303633 68305689 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03884 K12471 - gmx:100811093 503.056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03884 4 68303633 68305689 Seca4g09066 4 215573876 215576039 PCT