Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09022 ATGCCTCTGCCCGAACGCACGTTCAAAAATGTTAACACCACAAGAAATCCTACCATTGCTACCATGGAACAATTCCTTCGAGGAGGGGAATCCTCTAGGATGTCACCAACCTACTCTCCCACCTCTCCTTCTCCCTCCTCTCCTTATTTTGAGAGGTTGAAGAACCAGGACCTAGAAGATGACCAAGGCCTCTATCAGAAGAAATCAGTTCTCTCCAAAGTGAAGGAGAGGGCCAGGAAATTTCGCCACAGCCTCAGCAAGAAAAAACAGGAGGATGGGAGCCTCACTCCTTCTTGGGGTGTTAGCTTAGATGATGAAGAGGAAGAAGAAGATGCTGAATACCTTGGAGCCCCAATCTATGAATCAGAGCTGGCACCTGATGAATACAAAGAAAATGCAAGGCAGCATCCAAGAGCGAATCCAGTCATCTCTGAGAAGCGAATTTTGCGGAACACATTCAAATCAGGAGTGGAACAAGATCAAGACAAGACACTTAGTACTGTCAAGTCCACAACAACTCATGGTCCAAACAAGACAATGACTGAAACCTTAGCTGAGAAACTAACACCAGCCTATTTAGCTGAGAAACTGACACCATCCTCTATAGCTGAGAAACTGACACCATCCTCTTTAGCTGAAGGGTCAGATGCAGCTCATTCTAATCCCTCCAAAACTCAAGCTGTTTCCAGAAATTCTCCTGCCAATATGTCATCCCAAACTTCTTCTGTTGCCCCATCAGCTTCATCAGTTCCATCAACTATACAAAATTCATCATCCTCATCTGTTCCGCTGAGTGGGAAGAATACAAGCCCCATGGGTCCTGCAATGAAAGATTATGTGGTGAATAAATTTGAGCCAGGGAATGATGAGAAAACTCCATCCAAGGTGATGGCATATGAAGGAGTGAGTCCTAGGAAAACTCCAAATAATAGTACAGGTGTGATGGAGAGGATGAAAGGAGCTGTAAATTCTTTGCTCCGGAATGATGAACCATCACAACAATATGCAGTCAAAACTCCTACTACACACGCATCCTCGCAAATAACCAAAACTCAAGAAGTTGATCAGGAAGAGAACCATGGGAGAATTCTTCAGGCAAATTGA 1104 0.4438 MPLPERTFKNVNTTRNPTIATMEQFLRGGESSRMSPTYSPTSPSPSSPYFERLKNQDLEDDQGLYQKKSVLSKVKERARKFRHSLSKKKQEDGSLTPSWGVSLDDEEEEEDAEYLGAPIYESELAPDEYKENARQHPRANPVISEKRILRNTFKSGVEQDQDKTLSTVKSTTTHGPNKTMTETLAEKLTPAYLAEKLTPSSIAEKLTPSSLAEGSDAAHSNPSKTQAVSRNSPANMSSQTSSVAPSASSVPSTIQNSSSSSVPLSGKNTSPMGPAMKDYVVNKFEPGNDEKTPSKVMAYEGVSPRKTPNNSTGVMERMKGAVNSLLRNDEPSQQYAVKTPTTHASSQITKTQEVDQEENHGRILQAN. 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09022 367 MobiDBLite consensus disorder prediction 330 352 - -
Seca4g09022 367 MobiDBLite consensus disorder prediction 128 147 - -
Seca4g09022 367 MobiDBLite consensus disorder prediction 28 51 - -
Seca4g09022 367 MobiDBLite consensus disorder prediction 153 186 - -
Seca4g09022 367 MobiDBLite consensus disorder prediction 128 143 - -
Seca4g09022 367 MobiDBLite consensus disorder prediction 209 268 - -
Seca4g09022 367 MobiDBLite consensus disorder prediction 158 184 - -
Seca4g09022 367 MobiDBLite consensus disorder prediction 77 112 - -
Seca4g09022 367 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 22 366 IPR037491 GO:0009737
Seca4g09022 367 MobiDBLite consensus disorder prediction 26 51 - -
Seca4g09022 367 MobiDBLite consensus disorder prediction 209 277 - -
Seca4g09022 367 MobiDBLite consensus disorder prediction 330 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09022 Seca-Chr4 214885464 214887722 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09022 - - gmx:102664483 354.369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03817 4 67305727 67308055 Seca4g09022 4 214885464 214887722 PCT