Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03817 ATGGCTCAACTCGAACGCCCCCAGAGACATGTTGAATCTTCAAAATCCCCTACCATCCATACCATGGAACAACTCCTCCGAGCAGAAGGCTCGAAGTCTAATAAGCAGTCACCAACATACTCTTCTTGCTCCTCCACTTCCTCCTCTTCCTCATCCTCCCCTTTCTTCCAAAGGTTGAGGCACCATGACTTAGATGATGACCATTCCCCCAATCAGAAGAAATCAGTTCTCACCAAAGTGAAGGAGAAGGCCAAGAAATTACGCCACACCCTCAGCAAGAAGAAACACGACGACGGCAACTCCAGTCCCTCCTGGATTGCTAGCTTAGAAGCTGATGGAGTAGAAGAAGATGCTGAATACCTTGGAGCTCCAATGTACCAATCGGAGAAGGCACCTGTGGGATACAAAGAAAATACAAGGCAGCATTCAAGAGGGAGTCCAGTAATCTCAGAGAACAAGCATGTTAATGTTATGTCAAACAGTGACAAAACTAGAATGGAATATGATAATAAAGAAAAGTCGCTAACTCGTTCTCTGTCCAAGAGAACAACCCAACCTACAACACCACCAGCAACTCCAACTGCTTCTGCTGCTGCTGCTAATGCACTTTCTGGTTCAAACAGAACAAAGACAAGAACCGTAGCAGAGAAACTGACACCAAGTTATGCTGAAGGATCAGATGCAGCTCATTCTGTAACCTCCAAAATTCAAGGCCTCAATGTTTCTAAACCCGCAGAGCAGCAGCAGCATCATCATCATCACACTTCATCATCAAATCTTGCACCTGCAAAAGCTCATAATTCTCCTCCATCACTTGCTGCTTCACGTAGTGCTTCTGCCAAGGTGACCTCCCAAGCTTCTTCAAGCGTCTCTGTTGTCCCTCGAACTTCATCAGCTCCAGTGGCTGCTGTTCCACCTTCATCACCCTCGTCTGCTCCATCGAGTGGGAAGAGTACTAGCCCCACCTCGCAATTATGGGACAAGGGTGTTTCGGTGAAAGACTACTTGATGAACAAATTGGAGCCAGGGGAAGATGAGAAAGCTCTGTCTCAGGTGATATCTGAAGCAATGAGTCCTAGAAGAACTCCTGGTGATGCAGGTGTGATGGAGAAGGTGAGAGAAGCTGTAACCTCTTTGCTCAGAAATGAGGAACCAACAAAATATGCAGAGACAAACACAACTCCTACTACTATGACATCATCTCAATCTCAAATCCCAGCATCTAACAATGCTACTCGTGCTTCATCTCAAATCCCAGCATCTACCACTGCCTATGCTGCTCGCAATTCACCCCAAATTCCAGTATCTACCAACCCTCACGAAGTGGTTCAGGAAGAAAACCATGGCAGGATTCTTCAGGCAAATTGA 1368 0.4635 MAQLERPQRHVESSKSPTIHTMEQLLRAEGSKSNKQSPTYSSCSSTSSSSSSSPFFQRLRHHDLDDDHSPNQKKSVLTKVKEKAKKLRHTLSKKKHDDGNSSPSWIASLEADGVEEDAEYLGAPMYQSEKAPVGYKENTRQHSRGSPVISENKHVNVMSNSDKTRMEYDNKEKSLTRSLSKRTTQPTTPPATPTASAAAANALSGSNRTKTRTVAEKLTPSYAEGSDAAHSVTSKIQGLNVSKPAEQQQHHHHHTSSSNLAPAKAHNSPPSLAASRSASAKVTSQASSSVSVVPRTSSAPVAAVPPSSPSSAPSSGKSTSPTSQLWDKGVSVKDYLMNKLEPGEDEKALSQVISEAMSPRRTPGDAGVMEKVREAVTSLLRNEEPTKYAETNTTPTTMTSSQSQIPASNNATRASSQIPASTTAYAARNSPQIPVSTNPHEVVQEENHGRILQAN. 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03817 455 MobiDBLite consensus disorder prediction 158 178 - -
Seca4g03817 455 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 47 454 IPR037491 GO:0009737
Seca4g03817 455 MobiDBLite consensus disorder prediction 14 57 - -
Seca4g03817 455 MobiDBLite consensus disorder prediction 139 157 - -
Seca4g03817 455 MobiDBLite consensus disorder prediction 226 245 - -
Seca4g03817 455 MobiDBLite consensus disorder prediction 388 442 - -
Seca4g03817 455 MobiDBLite consensus disorder prediction 134 326 - -
Seca4g03817 455 MobiDBLite consensus disorder prediction 254 326 - -
Seca4g03817 455 MobiDBLite consensus disorder prediction 179 216 - -
Seca4g03817 455 MobiDBLite consensus disorder prediction 388 455 - -
Seca4g03817 455 MobiDBLite consensus disorder prediction 1 105 - -
Seca4g03817 455 MobiDBLite consensus disorder prediction 58 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03817 Seca-Chr4 67305727 67308055 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03817 - - aprc:113859169 396.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03817 4 67305727 67308055 Seca4g09022 4 214885464 214887722 PCT