Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08799 ATGTTCACACACAAAACAAGGCCAACCAGAGGCAGCCACTTAGAGGTTGGGGAAGAAGCAACTTCCTCAGTGATTGAGTGCTTTTTCTGTGGCCTGCCACACTCAATGGCTTCAGTTGGTGCAGTCAAGTTCTTGCTATTCTTAGTTCTATGGCTCCTCTACATTCTACCTCTCTGTCAAGGTAAGCAGAACTGGAATGGATATGGCTACCCTTTTATCAGAAAAGCAAGCTCATTCTCATCTTCACCATCAGTTTCAACTACCAACACCAGTAATGGCTATGACTACATAATAGTGGGAGGTGGCACAGCAGGGTGCCCTTTGGCTGCAACCCTTTCACAAAACTTCAATGTTCTGTTGCTTGAAAGAGGAGGAGTCCCTTTCAACAACCCCAATGTGTCCTTTCTACAGAACTTCCACATTACTTTGGCAGACACTTCACCATCTTCAGCTTCCCAATGCTTCATTTCAACTGATGGAGTTCTCAATGCAAGGGCAAGGATTTTGGGTGGTGGCAGTTCCATTAATGCTGGCTTCTACACTAGAGCTAGCCCAAGATTTATAGAGAAGGTGGGGTGGGATGGCAAGCTAGTAAATCAGTCTTATCCATGGGTTGAGAAGCAGATTGTTCACCGCCCAAAGTTTTCAGCATGGCAGAGAGCAGCTACGGACAGCCTTCTAGATGTTGGTGTGTCTCCTTTTAATGGCTTCACTTATGATCACAAGTATGGAACCAAAGTTGGTGGAACCATTTTTGACAGATTTGGTCGTCGCCACACTTCTGCTGAACTACTTGCTTCTGCCAACCCTGACAAACTCACTGTTTTGATCTATGCCACTGTCCAAAAGATTGTTTTTGATACAACAGGAAAAAGACCAAAAGCTATGGGGGTTATTTTCAAGGATGAACATGGGAAACAGCATCGGGCTATTCTTGGAAATGATAGGCAGAGTGAAGTGATTGTTTCTAGTGGGGCAATTGGGACTCCTCAATTGCTATTGCTCAGTGGAATTGGGCCAAAAGCAGAACTTCAGGACTTGAACATCCCTGTGGTGCTTGACAACCAATTTGTTGGGAAGGGCATGGCTGATAATCCCATGAACACAATTTTCATTCCTTCTAAGAGACCAGTTCAACAGTCACTCATAGAAACTGTTGGTGTTACCAATTTGGGTGTGTACATTGAGACTAGCTGTGGGTATGGACAGTCCAATGATAGCATTCATTGCCACCATGGTTTGTTGTCAGCTGAGATTGGACAGCTCTCAACCATTCCTCCCAAGCAAAGATCCCCAGAAGCTGTTCAAGCTTTTGTCAAGAGCAAGAAAGACATACCAATTGAAGCATTCAGGGGAGGCTTCATCTTATCAAAAGTTGCCAATCCTTGGTCAACAGGTGAACTGAAGTTGGTTAACACCAATGTGGAGGACAACCCTGCTGTTACCTTCAACTACTTCAGTCACCCATATGATCTTCAGCGCTGTGTGGAAGGAATCCGCTTGGCAACTAAGGTTGCTCAGTCAGAGCACTTCACAAACTACACTATGTGTGACAAACAAACTACAGAGGAACTTCTTAACCTCACTGTGAAGGCTAATGTCAACCTCATACCAAAGCATGTCAATGACACACAATCACTAGAACAGTTTTGCAAAGACACTGTGATCACTATTTGGCACTACCATGGTGGGTGCCATGTGGGGAAGGTAATCAACTCTGATTATAAAGTTCTTGGTGTTGACAGACTCCGAGTGGTAGATGGTTCAACATTTACTGAGTCACCAGGAACCAATCCTCAAGCTACTGTGATGATGATGGGAAGGTACATGGGACTGAAGATTTTAAGAGAAAGGTTGGGGAAATCTGCTGGTATTTAA 1878 0.4441 MFTHKTRPTRGSHLEVGEEATSSVIECFFCGLPHSMASVGAVKFLLFLVLWLLYILPLCQGKQNWNGYGYPFIRKASSFSSSPSVSTTNTSNGYDYIIVGGGTAGCPLAATLSQNFNVLLLERGGVPFNNPNVSFLQNFHITLADTSPSSASQCFISTDGVLNARARILGGGSSINAGFYTRASPRFIEKVGWDGKLVNQSYPWVEKQIVHRPKFSAWQRAATDSLLDVGVSPFNGFTYDHKYGTKVGGTIFDRFGRRHTSAELLASANPDKLTVLIYATVQKIVFDTTGKRPKAMGVIFKDEHGKQHRAILGNDRQSEVIVSSGAIGTPQLLLLSGIGPKAELQDLNIPVVLDNQFVGKGMADNPMNTIFIPSKRPVQQSLIETVGVTNLGVYIETSCGYGQSNDSIHCHHGLLSAEIGQLSTIPPKQRSPEAVQAFVKSKKDIPIEAFRGGFILSKVANPWSTGELKLVNTNVEDNPAVTFNYFSHPYDLQRCVEGIRLATKVAQSEHFTNYTMCDKQTTEELLNLTVKANVNLIPKHVNDTQSLEQFCKDTVITIWHYHGGCHVGKVINSDYKVLGVDRLRVVDGSTFTESPGTNPQATVMMMGRYMGLKILRERLGKSAGI. 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08799 625 PANTHER OSJNBA0019K04.7 PROTEIN 55 619 - -
Seca4g08799 625 SUPERFAMILY FAD-linked reductases, C-terminal domain 362 564 - -
Seca4g08799 625 Pfam GMC oxidoreductase 462 608 IPR007867 GO:0016614
Seca4g08799 625 SUPERFAMILY FAD/NAD(P)-binding domain 89 617 IPR036188 -
Seca4g08799 625 Pfam GMC oxidoreductase 94 366 IPR000172 GO:0016614|GO:0050660
Seca4g08799 625 ProSitePatterns GMC oxidoreductases signature 2. 325 339 IPR000172 GO:0016614|GO:0050660
Seca4g08799 625 PIRSF Alcohol_oxidase 72 624 IPR012132 GO:0050660
Seca4g08799 625 Gene3D - 211 557 - -
Seca4g08799 625 Gene3D - 94 607 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08799 Seca-Chr4 209706381 209718102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g08799 75 618 Miscellaneous Gene Families AT5G51950 51.366 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08799 K15403 - gmx:100818122 1000.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11773 4 258093339 258100569 Seca4g08799 4 209706381 209718102 PCT