Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05191 ATGACTTGGAAAAGCAGAGGAGACTTGCCTTCTAGAAGCGTTATATCGCAGAAATGGGCACTTTTCCTCTGTCTTGGAAGCTTCTGTGCTGGGATGCTCTTCACTAACAGGATATGGACTATTCCTGAACATAAAGAACTTGCACGACCAACAGCTACTGAAACTGGTAAATTGAATGTAGTTTCAGAGGGTTGTAATTCGAGAATTTTGCAAGAGATGGAAGTGAAGCGTGAAAGTTATAATGAAGTTTTCAAGGGTCATAACTCCATACAAAATTTGGACAAGACTATTTCAAACTTAGAGATGGAATTGGCTGCTGCTAGAGCAGTTCAGGAATCTATACGAAGTGGTGCTCCTGTTCCAGAAGAAATAAGGATGACTGAGTCATCTGGTAAGAGAAGGTACCTTATGGTCGTAGGTATTAATACTGCATTTAGCAGCCGGAAAAGAAGAGACTCAGTTCGGGCCACTTGGATGCCACAAGGTGAGAAAAGAAAGAAGCTAGAGGAAGAGAAGGGTATTGTCATGCGCTTTACGAATTATAAATTTGATCTGGTTTTTTCTTCTTTGTCTAGTGCTACATCAGGAGGTATCCTAGATAGAGCTATTGAAGCAGAGGACAGAAAACATGGAGATTTCTTGAGGCTGAATCATGTTGAAGGATACCTTGAATTGTCAGCAAAGACAAAGACATACTTTGCCACTGCTGTGAACTTATGGGATGCTGACTTTTATGTCAAAGTTGATGATGATGTTCATGTAAATATAGCAACACTGGGAGATACTCTAGCTAGACACAGGTCAAAACCAAGGGTATACATTGGATGCATGAAATCTGGACCTGTCCTATCTCAAAAAGGGGTAAGGTACCATGAACCTGAGCATTGGAAATTTGGTGAGGCTGGAAACAAGTACTTCCGTCATGCCACAGGGCAGTTGTATGCCATTTCAAACGATTTGGCAACATACATATCAATTAACCAGAATGTTCTTCACAAGTATGCCAATGAGGATGTGTCACTAGGATCTTGGTTTATTGGACTTGATGCGGAGCACATAGATGATAGAAGACTTTGCTGTGGCACTCCTCCAGATTGTGAATGGAAGGCCCAGGCAGGCAACATTTGTGTTGCTTCATTTGATTGGAGCTGCAGTGGAATTTGCAGGTCTGCTGAAAGGATGAAAGAAGTACATAGGAGGTGTGGAGAAGGTGAGCATGCTTTGTGGAGTGCCTCTTTCTAG 1242 0.4203 MTWKSRGDLPSRSVISQKWALFLCLGSFCAGMLFTNRIWTIPEHKELARPTATETGKLNVVSEGCNSRILQEMEVKRESYNEVFKGHNSIQNLDKTISNLEMELAAARAVQESIRSGAPVPEEIRMTESSGKRRYLMVVGINTAFSSRKRRDSVRATWMPQGEKRKKLEEEKGIVMRFTNYKFDLVFSSLSSATSGGILDRAIEAEDRKHGDFLRLNHVEGYLELSAKTKTYFATAVNLWDADFYVKVDDDVHVNIATLGDTLARHRSKPRVYIGCMKSGPVLSQKGVRYHEPEHWKFGEAGNKYFRHATGQLYAISNDLATYISINQNVLHKYANEDVSLGSWFIGLDAEHIDDRRLCCGTPPDCEWKAQAGNICVASFDWSCSGICRSAERMKEVHRRCGEGEHALWSASF. 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05191 413 FunFam Hexosyltransferase 129 359 - -
Seca4g05191 413 Pfam Galactosyltransferase 149 354 IPR002659 GO:0006486|GO:0016020|GO:0016758
Seca4g05191 413 SUPERFAMILY PspA lactotransferrin-binding region 45 108 - -
Seca4g05191 413 Coils Coil 90 110 - -
Seca4g05191 413 Pfam Domain of unknown function (DUF4094) 16 109 IPR025298 -
Seca4g05191 413 Gene3D - 133 355 - -
Seca4g05191 413 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 94 354 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05191 Seca-Chr4 96979909 96983957 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g05191 1 413 Glycosyltransferase AT1G05170 74.038 0.0 658
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05191 K20855 - gmx:100794838 725.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g05191 4 96979909 96983957 Seca4g05191 4 96979909 96983957 ECH
Seca4g05191 4 96979909 96983957 Seca12g00180 12 1666582 1672374 ECH
Seca4g05191 4 96979909 96983957 Seca4g05191 4 96979909 96983957 PCT