Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05148 ATGATGTTCCACCGAAGAAAAAAAGAACCTAATGCTTTGCCTCTATCCAATTCTGACACCCCGATGCCTCCTCGTAGTTCTAGTTTCAGCCTCCTCAGAAGCGCAACTTCACCTTTCTCATTCTCATTTTCTGTCTCCTTCAAATCCTTCCTCTTCATCCTCTCTCTGCTTCTCAACCTCTATCTCCTTCTTATCCTGTGGGCCCCTTCCTCCGCCCCCTTAACCCCCTCCGCTGTCATCTCTCGCCTCTCCCCCACCACGCGCCGCCACATCCTCTTCACCGTCGCCTCCTCCTCCCTCTCCTGGCCGCGTCGCCAGCCTTACATCCGCCTATGGTACTCCCCCAACTCCACCCGCGCACTTGCCTTCCTCGACTCCCTCCCTCCCGACACTCCTCCCTCGTCTTCCTCGCCGCCGGTGGTGATCTCCGGCGACGCCTCAGGCTTCCCCTACTCCTTCCCGGGAGGGCTCCGGTCGGCGATACGCGTGGCCCGGGTGGTGAAGGAGGTTGTCGATCGGAACGAGTCGGACGTGCGGTGGTTCGTGTTCGGCGACGACGACACGGTGTTCTTTGTGGACAATGTGGTGAAGACTCTGTCGAAGTACGATCACAATCGGTGGTTTTACGTGGGGACCATCTCGGAGAGTTACAATCAGAATGTGAGGTATTCGTTTGAGATGGCGTTTGGGGGAGGGGGTTTCGCGATTAGCTACTCGCTTGCTAGGGTTTTAGCTAGGGTTTTGGATTCGTGTTTGAGGAGGTATGGCCATTTGTATGGCAGCGATGCCAGGATTTATGCATGCGTTGCTGAGCTCGGTGTAGCGTTAACCCATGAACCTGGGTTTCATCAGTTAGATATGCGGGGGAATTTGTTTGGGATGCTGGCTGCACATCCATTATCTCCTTTGTTGTCACTTCATCACTTGGAAGCAGTGGAGCCTCTCTTTCCTAACATGAACAGAACACAAGCTTTGGAACATCTTTTTGCAGCTGCAAATGTGGATCCTGCTAGGATCCTGCAGCAAACTGTCTGCTATGATCTATCAAATTCTTTGACTTTCTCAGTTTCTTGGGGTTTTGCTATCCAGGTTTTTCAAGGAAATGAACTTCTACCTGATCTCCTTTCACTACAGAGAACTTTTGTGCCATGGAGGAGGGGTAGTAAAGTTGAGGCCAATTATATGTTTAATACAAGAGACTATCCTAAAGATCCTTGTAAACGACCTTCTATATTTTTCTTCAAAAGCGCTACATCTGATAAAAGGGGCATTTGGAGCAATTACAGTAGGTATGTAGAGAAGAACTGCTTTGAATCAAATGTGGCACGGCTAAAGGAGATCATAGTTTTTTCAAGGAAGCTGGAGCTTAATATTGAACAGATGAAAGCCCCCCGTCGTCAGTGCTGCAACGTTTTGCCATCTTCTAACGAATCAATCAGTATTCATATTAGACAGTGTGAAACCAATGAACTGATCTCTTTGCAATCGTAG 1491 0.495 MMFHRRKKEPNALPLSNSDTPMPPRSSSFSLLRSATSPFSFSFSVSFKSFLFILSLLLNLYLLLILWAPSSAPLTPSAVISRLSPTTRRHILFTVASSSLSWPRRQPYIRLWYSPNSTRALAFLDSLPPDTPPSSSSPPVVISGDASGFPYSFPGGLRSAIRVARVVKEVVDRNESDVRWFVFGDDDTVFFVDNVVKTLSKYDHNRWFYVGTISESYNQNVRYSFEMAFGGGGFAISYSLARVLARVLDSCLRRYGHLYGSDARIYACVAELGVALTHEPGFHQLDMRGNLFGMLAAHPLSPLLSLHHLEAVEPLFPNMNRTQALEHLFAAANVDPARILQQTVCYDLSNSLTFSVSWGFAIQVFQGNELLPDLLSLQRTFVPWRRGSKVEANYMFNTRDYPKDPCKRPSIFFFKSATSDKRGIWSNYSRYVEKNCFESNVARLKEIIVFSRKLELNIEQMKAPRRQCCNVLPSSNESISIHIRQCETNELISLQS. 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05148 496 Pfam Protein of unknown function, DUF604 219 469 IPR006740 -
Seca4g05148 496 MobiDBLite consensus disorder prediction 1 23 - -
Seca4g05148 496 Gene3D - 80 342 - -
Seca4g05148 496 FunFam Fringe-related protein 80 321 - -
Seca4g05148 496 PANTHER FRINGE-RELATED 52 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05148 Seca-Chr4 96165608 96169075 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g05148 86 496 Glycosyltransferase AT4G15240 64.096 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05148 - - gmx:100813277 701.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g05148 4 96165608 96169075 Seca4g05148 4 96165608 96169075 ECH
Seca4g05148 4 96165608 96169075 Seca4g05147 4 96149645 96152165 PCT