Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03869 ATGGGTAGCCCCCCCAAGAAGAATGAAAGTAAGGGCTTTTTTGCCGCCATGTCTTCTGGCTTGTCCATGTTCAGCAACGCCATGCACCGATCTGTTAACGGGCTTCTCGGATATGAAGGTGTAGAAGTCATAAATCCAGAGGGAGGTAAAGATGATGCAGAGGAGGAAGCTCATAGAGGAAGATGGAAACAGGAGGAAAGAGATAGTTACTGGAAGATAATGCAGAAATATATTGGCTCAGATGTAACATCAATGGTAACACTACCGGTTATTATATTTGAACCAATGACCATGCTTCAGAAAATGGCCGAGTTGATGGAGTACTCCTACATGTTAGATCAAGCAGATGAATCAGAGGATCCATACATGCGGTTGGTGTATGCATCGTCATGGGCTATATCTGTGTACTTTGCATACCAACGAACCTGGAAGCCTTTTAATCCTATCCTTGGAGAGACTTATGAAATGGTTAACCATCATGGAATTACATTTCTTGCAGAACAGGTGAGTCATCATCCCCCAATGAGTGCTGGGCATGCCGAGAATGAGCATTTTACATATGATGTGACTTCAAAGTTAAAAACTAAGTTTTTGGGAAATTCTGTCGATGTTTACCCTGTTGGAAGAACACGTGTGACCCTTAAGAGGGATGGTGTAGTCTTAGATTTGGTGCCACCTCCTACAAAGGTTAACAACCTGATATTTGGCCGGACTTGGGTTGATTCACCTGGAGAGATGATAATGACAAATTTGACAACTGGAGACAAAGCTGTACTATACTTTCAACCATGTGGATGGTTTGGTGCCGGTCGCTATGAAGTGGATGGTTATATTTATAGTTCTTCTGAGGAGCCTAAAATATTAATGACTGGGAAGTGGAATGAGTCAATGAGTTATCAACCTTGTGATTCAGAAGGAGAGCCTCTTCCAAACACAGAATTGAAAGAGGTTTGGCATGTTGCTGATATTCCACCAAATGACAAATTCCAGTATACATACTTTGCTCATAAAATAAACAGCTTTGACACTGCACCTAGAAAGTTGTTAGCATCAGACTCTCGCCTACGTTCTGATAGATATGCACTTGAGATGGGCGATCTGTCAAAATCTGGGGCAGAAAAGAGCAGTTTGGAGGAGAGGCAGCGTGCTGAAAAGAGAACCCGGGAGGCTAAAGGGCATACCTTCACACCAAGATGGTTTGATTTAACTGAAGAAGTGACACCAACTCCTTGGGGTGATTTGGAAATCTACCAATATAATGGTAAATACACTGAACATCGGGCTGCTGCAGATAACTCAGGCAGCGTTGATGATGTTGATATTAAATCAATTGAATTCAATCCATGGCAGTATGGTGACTTGGCCACAGAATGA 1374 0.425 MGSPPKKNESKGFFAAMSSGLSMFSNAMHRSVNGLLGYEGVEVINPEGGKDDAEEEAHRGRWKQEERDSYWKIMQKYIGSDVTSMVTLPVIIFEPMTMLQKMAELMEYSYMLDQADESEDPYMRLVYASSWAISVYFAYQRTWKPFNPILGETYEMVNHHGITFLAEQVSHHPPMSAGHAENEHFTYDVTSKLKTKFLGNSVDVYPVGRTRVTLKRDGVVLDLVPPPTKVNNLIFGRTWVDSPGEMIMTNLTTGDKAVLYFQPCGWFGAGRYEVDGYIYSSSEEPKILMTGKWNESMSYQPCDSEGEPLPNTELKEVWHVADIPPNDKFQYTYFAHKINSFDTAPRKLLASDSRLRSDRYALEMGDLSKSGAEKSSLEERQRAEKRTREAKGHTFTPRWFDLTEEVTPTPWGDLEIYQYNGKYTEHRAAADNSGSVDDVDIKSIEFNPWQYGDLATE. 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03869 457 Gene3D - 359 444 - -
Seca4g03869 457 Gene3D - 151 328 - -
Seca4g03869 457 SUPERFAMILY Oxysterol-binding protein-like 64 439 IPR037239 -
Seca4g03869 457 Pfam Oxysterol-binding protein 69 427 IPR000648 GO:0008289
Seca4g03869 457 ProSitePatterns Oxysterol-binding protein family signature. 167 178 IPR018494 -
Seca4g03869 457 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 62 427 IPR000648 GO:0008289
Seca4g03869 457 MobiDBLite consensus disorder prediction 372 391 - -
Seca4g03869 457 MobiDBLite consensus disorder prediction 370 391 - -
Seca4g03869 457 FunFam Oxysterol-binding protein-related protein 3C 359 452 - -
Seca4g03869 457 FunFam oxysterol-binding protein-related protein 3C 151 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03869 Seca-Chr4 68100182 68108355 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03869 - - gmx:100779808 874.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03869 4 68100182 68108355 Seca4g03869 4 68100182 68108355 ECH
Seca4g03869 4 68100182 68108355 Seca4g09048 4 215247070 215253035 PCT