Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03580 ATGGTGGTTCTTACACCTGGAAGTTCAAATGTTGGAGCAAAGCATCACACTCTAGCTCCATTGAGAGTTTTAAGGGGTCTGGTGTGTCTACTGGTGCTGCTTTCAACAGCGTTTATAATGTTAGTGTTCTTTGGCTTTATTAGTGCTGTTATAGTGCGATTTTTTAGCATCAGTTACAGCAGGAAAACAACTTCCTTTTTCTTTGGTGCTTGGCTAACCTTGTGGCCTGTCCTATTTGAAAAAATCAACAAGACTAAAGTTGTGTTCTCTGGAGCTATTGTTCCTTCAAGAGAACGGATCTTACTAATTGCAAATCACAGAACTGAGGTTGACTGGATGTATTTATGGGACCTTGCCTTGAGAAAAGGATGCATTGGATACATAAAATATATACTTAAGAGCAGCTTGATGAGACTTCCAATTTTTGGTTGGGCATTTCACATACTGGAGTTCATCCCAGTGGAAAGGAAGTGGAAGGCTGATGAGTCAACCATGCGCAATATGCTTTCTACATTCAAGGATCCACAAGATCCTCTCTGGCTTGCTCTTTTCCCAGAAGGCACTGATTTTAGTGAGCAGAAGTGTCTTCGGAGTCAGAAATATGCTACTGAACATGGGTTACCAATTCTGAAAAATGTTTTACTTCCAAAGACCAAGGGGTTCTACACCTGCATGCAAGAGTTGAGGGGCTCTCTGACTGAAGGTTGTCCTGGCTTTCTTTCTTTTCTTTGTTTATATAATTATTGGTAA 750 0.4067 MVVLTPGSSNVGAKHHTLAPLRVLRGLVCLLVLLSTAFIMLVFFGFISAVIVRFFSISYSRKTTSFFFGAWLTLWPVLFEKINKTKVVFSGAIVPSRERILLIANHRTEVDWMYLWDLALRKGCIGYIKYILKSSLMRLPIFGWAFHILEFIPVERKWKADESTMRNMLSTFKDPQDPLWLALFPEGTDFSEQKCLRSQKYATEHGLPILKNVLLPKTKGFYTCMQELRGSLTEGCPGFLSFLCLYNYW. 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03580 249 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 18 232 - -
Seca4g03580 249 Pfam Acyltransferase 94 228 IPR002123 GO:0016746
Seca4g03580 249 SMART plsc_2 100 222 IPR002123 GO:0016746
Seca4g03580 249 CDD LPLAT_LCLAT1-like 78 233 - -
Seca4g03580 249 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 34 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03580 Seca-Chr4 62212008 62215755 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g03580 14 241 Miscellaneous Gene Families AT1G75020 62.605 2.55e-107 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03580 K13513 - gmx:100814885 400.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03580 4 62212008 62215755 Seca4g03580 4 62212008 62215755 ECH
Seca4g03580 4 62212008 62215755 Seca12g02419 12 36080938 36089410 ECH