Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02419 ATGTTAGACATGTATGACTTTGAAAACGATATCTGGTTATGTCACTCCTTTGCAGGCCAATGTTTCAATGCCACTTCATTTCAACCTGCTATAAACGTGCTCAAAGAAATCCAGTCATTTCTTGAAGCAAATCCATCAGAAATTGTGACCATCTTCATTGAAGACTATGTGACATCTTCCCAGGGTCTTAGCAAGGTGTTCAATGCTTCTGGGTTGAGCAAGTATTGGTTCCCAATATCTAGAATGCCTAAAAATGGTGAAGATTGGCCATCCGTTGATGACATGGTCCAAAAGAATCAACGCTTGGTCGTTTTCACCTCCAAATCATCTAAAGAAGCTTCCGAGGGTATTGCATACCAATGGAAATATGTGGTAGAAAACCAATATGGAGATAATGGAATGAAAGCTGGTTCATGTCCAAATCGTGCAGAATCATCAGCTATGAACACAAAATCAAGGTCCCTAGTTCTGATGAACTATTTTCACACCGATCCTAATGCAAGTTTGGTTTGCGCTGACAATTCAGCTCCGTTACTTAGCATGATGAAGACTTGCCATGATGCTGCCGAAAACCGGTGGCCAAATTTCATTGCCGTTGATTTTTACCAGAGGAGTGATGGAGGAGGAGCCTCAGAAGCTGTTGATGAAGCCAATGGTCATTTAACTTGTGGATGTGACAACATTGCCTATTGCAAGGCAAATGCCACATATGGAACATGCGACGTGCCTCCCATTTCTCCTCCACCACCCGCAGCTGACGCCACCACCGCCACCGTGGATGGAGGAAACCAACCGTTAGAAGACAATGCTTTTATTGACACACCAGCCAAGCTGCTACAATATTTTGGGATAATTTTGGCAATGACGACTTTCTTGACTTGGTTCTAA 888 0.4313 MLDMYDFENDIWLCHSFAGQCFNATSFQPAINVLKEIQSFLEANPSEIVTIFIEDYVTSSQGLSKVFNASGLSKYWFPISRMPKNGEDWPSVDDMVQKNQRLVVFTSKSSKEASEGIAYQWKYVVENQYGDNGMKAGSCPNRAESSAMNTKSRSLVLMNYFHTDPNASLVCADNSAPLLSMMKTCHDAAENRWPNFIAVDFYQRSDGGGASEAVDEANGHLTCGCDNIAYCKANATYGTCDVPPISPPPPAADATTATVDGGNQPLEDNAFIDTPAKLLQYFGIILAMTTFLTWF. 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02419 295 Gene3D Phosphatidylinositol (PI) phosphodiesterase 1 220 IPR017946 GO:0006629|GO:0008081
Seca12g02419 295 SUPERFAMILY PLC-like phosphodiesterases 1 220 IPR017946 GO:0006629|GO:0008081
Seca12g02419 295 PANTHER UNCHARACTERIZED 1 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02419 Seca-Chr12 36080938 36089410 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02419 - - gmx:100809640 452.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03580 4 62212008 62215755 Seca12g02419 12 36080938 36089410 ECH
Seca12g02419 12 36080938 36089410 Seca12g02419 12 36080938 36089410 ECH