Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03412 ATGTGGAGAGAAATCCGGCTTTTGGCTGCTTCAAAACCAGTCATTGCTTCAATGTCTGACGTGGCAGCAAGTGGAGGATACTACATGGCAATGGGAGCTGAAGCTATTGTTGCAGAAAGTCTCACCTTAACTGGTTCAATTGGAGTGGTCACAGGAAAATTTAACCTAGAGAAACTATATGAGAAGATTGGCTTTAACAAAGAAATCATATCAAGGGGAAGATATGCTGAGCTTGTTGCTGCTGAACAACGTCCTTTTAGACCAGATGAAGCAGAGCTATTTGCCAAATCTGCGCAGCATGCTTATAAACAATTTCGAGACAAGGCAGCTTTATCCAGATCAATGACTGTAGATAAGATGGAGGAGGTCGCACAGGGGAGGGTTTGGACTGGTAAAGATGGAGCATCGCATGGTTTGGTTGATGCTATTGGTGGGCTTTCTCGAGCTATTGCCATAGCAAAGTTGAAGGCCAATATACCTCAAGACAGACAGGTAACTGTTGTGGAGATCTCCAGAACCAGCCCTTCTCTACCTGGAATTTTATTAGGCGTGGGGAATTCTCTCGTTGGAGTAGACAGAACATTGAAGGAATTGCTGCAGGGCTTGACATTTTCTGATGCAGTTCAAGCCCGGATGGACGGAATCATGTTTCAGACACTGGAAGGATCTCCTTACGCCAACCACATTTTGTCTATAATAAAAGATTACCTTAGTTCCCTGTAG 723 0.4426 MWREIRLLAASKPVIASMSDVAASGGYYMAMGAEAIVAESLTLTGSIGVVTGKFNLEKLYEKIGFNKEIISRGRYAELVAAEQRPFRPDEAELFAKSAQHAYKQFRDKAALSRSMTVDKMEEVAQGRVWTGKDGASHGLVDAIGGLSRAIAIAKLKANIPQDRQVTVVEISRTSPSLPGILLGVGNSLVGVDRTLKELLQGLTFSDAVQARMDGIMFQTLEGSPYANHILSIIKDYLSSL. 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03412 240 PANTHER PROTEASE 4 1 239 - -
Seca4g03412 240 Gene3D - 81 212 - -
Seca4g03412 240 SUPERFAMILY ClpP/crotonase 6 145 IPR029045 -
Seca4g03412 240 Gene3D - 1 80 - -
Seca4g03412 240 Pfam Peptidase family S49 8 158 IPR002142 GO:0006508|GO:0008233
Seca4g03412 240 CDD S49_Sppa_N_C 1 154 IPR047272 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03412 Seca-Chr4 59562733 59567873 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03412 K04773 - gmx:100781522 404.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01270 12 12399953 12409753 Seca4g03412 4 59562733 59567873 PCT