Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03123 ATGGGAAATTGCCAAGCAATTGATGCTGCAACGCTAGTGATTCAGCACCCTAGTGGCAAAGTAGAGAGGTTCTATTCACCACTCAGTGCAAGCCAAGTTATGAAAACCAACCCTGGTCATTATGTTGCCCTTCTTATCTCCACCACATTGTATCCAACCAAGGACATTGAAAATTGCCCCAATAAGAGTGACACCAAAAACAACAACAACACCAACACCAACCCTGTTCGTATAACTCGCATAAAGCTTCTCAAGCCAACGGATACACTCGTTCTAGGCCAAGTTTATAGACTCGTCACAACTCAAGAGGTCATGAAAGGTCTGAGGGAAAAGAAACAAGCAAAGTTGAGGCAGAACATGACAGAGTCATCTCACAAGTCAGATTGTGAGAAGGAAAAAGTGGGGTTAATGGAAAAACAAGCAAAGAAGTTTGACATGGATGATGACAACCAGGCAAACAAATCTGAAAGACCTCGATCAAGGACCACAGCACCAACTAATAATGGTGCCAGTGCCACAGCTAAGACAAGATTTTGGCAACCCTCTTTACACAGCATCTCAGAGATAGCCAGCTGA 576 0.4375 MGNCQAIDAATLVIQHPSGKVERFYSPLSASQVMKTNPGHYVALLISTTLYPTKDIENCPNKSDTKNNNNTNTNPVRITRIKLLKPTDTLVLGQVYRLVTTQEVMKGLREKKQAKLRQNMTESSHKSDCEKEKVGLMEKQAKKFDMDDDNQANKSERPRSRTTAPTNNGASATAKTRFWQPSLHSISEIAS. 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03123 191 Pfam PADRE domain 1 188 IPR025322 -
Seca4g03123 191 MobiDBLite consensus disorder prediction 157 191 - -
Seca4g03123 191 MobiDBLite consensus disorder prediction 110 191 - -
Seca4g03123 191 MobiDBLite consensus disorder prediction 110 156 - -
Seca4g03123 191 PANTHER EXPRESSED PROTEIN 1 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03123 Seca-Chr4 53575883 53577724 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03123 - - gmx:100813476 269.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03123 4 53575883 53577724 Seca4g03123 4 53575883 53577724 ECH
Seca12g01500 12 15258594 15260358 Seca4g03123 4 53575883 53577724 PCT