Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01500 ATGGGAAATTGCCAAGCTATTGATACTGCAACTCTTGTGATACAACAACCAAATGGGAAAGTAGAAAAGTTGTATTGGCCTGTGAGTGCTAGTGAAGTGATGAAGACTAACCCTGGTCACTATGTTGCCCTTCTTATCTCCACCACATTGTGCTCATCCAAGGATAATGAAAATTGTCCAAATAAGAGTGAAAATACCACCAACCCACTTCGCATTACTCGCATCAAGCTTCTCAAGCCAACAGATACCCTTGTGCTTGGCCAAGTTTATAGACTCATCTCAGCTCAAGCCTTTATGTTCTTCTTTGGTTCAGAGGTTATGAAGGGTCTGTGGGCAAAGAAACAAGCTAAGATGCAGAAAAACATGCCAGAATCAGCACAAAAATCAAATCAAATGAAGGAAAAGATGGACAAGGCAGCAAGGAGGTTTGAGCCAGAGGACAACCAGGAAACCAAAAATGAAAGACATGGGTCAAGGACCACAGCATCAACTAATGCTGCAAGTGCCACAGCTAAGTCAAGAACATGGCAACCTTCTTTACAAAGCATTTCAGAGGCTGCCAGCTGA 567 0.4286 MGNCQAIDTATLVIQQPNGKVEKLYWPVSASEVMKTNPGHYVALLISTTLCSSKDNENCPNKSENTTNPLRITRIKLLKPTDTLVLGQVYRLISAQAFMFFFGSEVMKGLWAKKQAKMQKNMPESAQKSNQMKEKMDKAARRFEPEDNQETKNERHGSRTTASTNAASATAKSRTWQPSLQSISEAAS. 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01500 188 MobiDBLite consensus disorder prediction 158 188 - -
Seca12g01500 188 MobiDBLite consensus disorder prediction 130 157 - -
Seca12g01500 188 MobiDBLite consensus disorder prediction 118 188 - -
Seca12g01500 188 PANTHER EXPRESSED PROTEIN 1 187 - -
Seca12g01500 188 Pfam PADRE domain 1 185 IPR025322 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01500 Seca-Chr12 15258594 15260358 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01500 - - aprc:113847180 302.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01500 12 15258594 15260358 Seca12g01500 12 15258594 15260358 ECH
Seca12g01500 12 15258594 15260358 Seca4g03123 4 53575883 53577724 PCT