Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03121 ATGGCAGGTGGAGGAGCTCCAGCAGCAAAGGCAGATGAGCCACAGCCACACCCACCAAAGGATCAGCTACCCAATATTTCTTACTGCATTACCAGTCCTCCTCCATGGCCTGAGGCCATACTTCTTGGTTTTCAACATTTTCTTGTGATGCTGGGCACAACTGTGCTCATTCCCACTGCTCTTGTTCCCCAGATGGGAGGTGGCAATGAGGAGAAGGCAAGAGTTATCGAAACACTTCTTTTTGTAGCTGGTATTAACACGTTGCTGCAAACACTGTTTGGAACTCGACTACCTGCAGTAATTGGAGGGTCTTATACCTTTGTTCCAACAACAATCTCAATTATTCTTGCTGGTCGATTCAGTAGTGAACCAGATCCAATAGAGAAATTCAAGAGGATAATGAGGGCAATCCAAGGTGCTCTTATTGTTGCTTCAACTCTTCAAATAGTACTAGGCTTTAGTGGCCTTTGGCGAAATGTTGCAAGGTTCTTAAGTCCACTTTCATCAGTTCCTTTGGTGTCTCTTGTTGGTTTTGGGCTGTATGAGTTAGGTTTTCCTGGGGTTGCTAAATGTGTAGAGATTGGACTGCCAGAGCTTATATTGCTAGTATTTGTTTCACAGTATGTGCCCCATGTACTACGTTCAGGGAAACATATCTTTGACCGTTTCGCTGTTATATTTACAATTGTGATTGTGTGGATATATGCTCATCTACTCACTGTTGGAGGGGCCTATAACAACGCTGCGCCTAAAACACAGGCATCATGCCGCACTGATCGGGCTGGTCTTATAGATGCTGCTCCTTGGATAAGAGTTCCATATCCCTTTCAATGGGGAGCACCTTCATTTGATGCAGGTGAAGCCTTTGCCATGATGATGGCAGCTTTTGTTGCTCTTGTAGAGTCCAGTGGAGCTTTCATTGCTGTATACAGGTATGCAAGTGCAACACCATTACCGCCATCTATTCTGAGTCGGGGTATTGGTTGGCAGGGAGTTGGCATTCTGTTATCAGGATTGTTTGGAACAGTTAATGGATCGTCTGTGTCCGTAGAAAATGCAGGTCTTTTGGCTTTGACCCGTGTTGGCAGTAGAAGAGTTGTGCAAATATCTGCTGGATTTATGATTTTCTTTTCAATTCTAGGAAAATTTGGAGCAGTTTTTGCCTCCATCCCACCTTCCATTATTGCTGCCCTGTATTGCTTGTTCTTTGCTTATGTTGGTGTGTTTGATTTTAAGATATATATACTCGGACATGTATTTACACTATGA 1269 0.4381 MAGGGAPAAKADEPQPHPPKDQLPNISYCITSPPPWPEAILLGFQHFLVMLGTTVLIPTALVPQMGGGNEEKARVIETLLFVAGINTLLQTLFGTRLPAVIGGSYTFVPTTISIILAGRFSSEPDPIEKFKRIMRAIQGALIVASTLQIVLGFSGLWRNVARFLSPLSSVPLVSLVGFGLYELGFPGVAKCVEIGLPELILLVFVSQYVPHVLRSGKHIFDRFAVIFTIVIVWIYAHLLTVGGAYNNAAPKTQASCRTDRAGLIDAAPWIRVPYPFQWGAPSFDAGEAFAMMMAAFVALVESSGAFIAVYRYASATPLPPSILSRGIGWQGVGILLSGLFGTVNGSSVSVENAGLLALTRVGSRRVVQISAGFMIFFSILGKFGAVFASIPPSIIAALYCLFFAYVGVFDFKIYILGHVFTL. 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03121 422 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 8 412 - -
Seca4g03121 422 MobiDBLite consensus disorder prediction 1 25 - -
Seca4g03121 422 Pfam Permease family 38 414 IPR006043 GO:0016020|GO:0022857|GO:0055085
Seca4g03121 422 NCBIfam purine/pyrimidine permease 40 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03121 Seca-Chr4 53549131 53555591 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g03121 1 407 Organic Solute Cotransporters AT5G62890 87.224 0.0 723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03121 - - gmx:100812585 753.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03121 4 53549131 53555591 Seca4g03121 4 53549131 53555591 ECH
Seca12g01501 12 15277879 15283930 Seca4g03121 4 53549131 53555591 PCT