Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01501 ATGGCAGGTGGTGGAGGAGCTCCAGCGCCTAAAGCAGATGAACCACAACCGCACCCACCCAAGGATCAGCTTCCTAATGTTTCTTACTGCATTACAAGCCCTCCTCCATGGCCCGAGGCCATTCTTCTTGGTTTTCAACACTATCTTGTGATGCTTGGTACAACTGTGCTAATTCCCACTGCTCTTGTTCCCCAGATGGGAGGTGGCAATGAGGAGAAAGCACAAGTTATCCAAACACTACTCTTTGTGGCTGGAATTAACACATTGCTGCAAACTCTGTTTGGAACTCGATTGCCTGCAGTAATTGGAGGGTCTTATACCTATGTTCCAACTACAATCTCAATTATTCTTGCTGGTCGATTCAGTGATGAGCCAGATCCTATAGAGAAATTCAAGAGGATAATGCGGGCAACCCAAGGTGCTCTTATTGTTGCTTCAACCCTTCAAATAGTACTAGGCTTTAGTGGCCTTTGGCGTAATGTTGCAAGGTTCTTGAGTCCACTTTCAGCAGTTCCTTTGGTATCTCTTGTTGGTTTTGGGCTGTATGAGTTAGGCTTTCCTGGGGTTGCTAAATGTGTAGAGATTGGACTGCCAGAGCTTATATTGCTAGTATTTGTTTCACAGTTTGTACCCCATGTGCTACATTCAGGAAAACATGTCGTCGACCGTTTTGCTGTTTTATTTACAGTTGCAATTGTGTGGTTATATGCTTATGTGCTCACTGTTGGGGGGGCCTATAACCATGCTGCACCTAAAACTCAGGCAACCTGCCGCACTGATCGTGCTGGCTTAATAGATGCTGCTCCATGGATACGAATTCCGTATCCATTTCAATGGGGAGCACCTTCATTTGATGCAGGTGAAGCCTTTGCCATGATGATGGCATCCTTTGTTTCCCTTGTGGAGTCCAGTGGAGCTTTTATTGCTGTTTATCGGTTTGCAAGTGCAACACCATTACCACCATCTATTCTTAGCCGGGGTATTGGTTGGCAGGGAGTTGGCATTCTGTTATCAGGATTGTTTGGAACTGGCAATGGATCCTCTGTATCTGTAGAAAACGCTGGTCTTTTGGCTTTGACACGTGTTGGCAGTCGAAGAGTGGTGCAAATATCTGCTGGGTTTATGATCTTCTTTTCAATTCTAGGGAAATTTGGAGCAGTTTTCGCCTCCATTCCACCTCCCATTGTTGCTGCACTGTATTGCTTGTTTTTTGCTTATGTTGGTGCGGGAGGTCTAAGTTTTCTTCAATTCTGCAACCTCAACAGCTTTAGAACAAAGTTCATATTAGGCTTCTCTATCTTCCTGGGTTTGTCTGTGTCACAGTACTTCAATGAGTACACAGCAATTAATGGTTTTGGTCCAGTTCACACTGGAGCAAGATGGTTCAATGATATAGTCAATGTCCCATTCCAATCAAAAGCATTTGTTGCGGGGGTTGTGGCATTTTTCCTTGATAACACACTACATAAGAAGGAAGCTGCTATTAGGAAAGATAGAGGGAAACATTGGTGGGACAAGTACCGGTCCTTCAAGACCGATACAAGAAGTGAGGAGTTCTATTCACTGCCTTTCAATCTAAACAAATACTTCCCATCAGTGTAA 1602 0.4432 MAGGGGAPAPKADEPQPHPPKDQLPNVSYCITSPPPWPEAILLGFQHYLVMLGTTVLIPTALVPQMGGGNEEKAQVIQTLLFVAGINTLLQTLFGTRLPAVIGGSYTYVPTTISIILAGRFSDEPDPIEKFKRIMRATQGALIVASTLQIVLGFSGLWRNVARFLSPLSAVPLVSLVGFGLYELGFPGVAKCVEIGLPELILLVFVSQFVPHVLHSGKHVVDRFAVLFTVAIVWLYAYVLTVGGAYNHAAPKTQATCRTDRAGLIDAAPWIRIPYPFQWGAPSFDAGEAFAMMMASFVSLVESSGAFIAVYRFASATPLPPSILSRGIGWQGVGILLSGLFGTGNGSSVSVENAGLLALTRVGSRRVVQISAGFMIFFSILGKFGAVFASIPPPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRTKFILGFSIFLGLSVSQYFNEYTAINGFGPVHTGARWFNDIVNVPFQSKAFVAGVVAFFLDNTLHKKEAAIRKDRGKHWWDKYRSFKTDTRSEEFYSLPFNLNKYFPSV. 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01501 533 MobiDBLite consensus disorder prediction 1 27 - -
Seca12g01501 533 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 8 531 - -
Seca12g01501 533 Pfam Permease family 39 443 IPR006043 GO:0016020|GO:0022857|GO:0055085
Seca12g01501 533 NCBIfam purine/pyrimidine permease 41 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01501 Seca-Chr12 15277879 15283930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g01501 9 533 Organic Solute Cotransporters AT5G49990 80.608 0.0 867
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01501 - - gmx:100791553 1025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01501 12 15277879 15283930 Seca4g03121 4 53549131 53555591 PCT