Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03089 ATGGTAGAGTTTGCTGTAATGGTGCTGGGACCCAATGTGGTTGTGAGAACCACTGAGAGTGTGAATGGATCTGGAAGGAGTATGATGATTGGGAAAGTCTATGCAGTGGACGGTGGAAAAGTAACCAAGTCAGTTTCATGTCATCAGAGTCTGTACCCTTACTTATTGTATTATTGTCACTCTGTCCCCAAAGTGAGAGTCTATGAAGCTGATATTCTTGACGTGGACACCAAGGTTAAGATCAATCATGGGGTTGCCATCTGCCACCTGGACACGTCAGCATGGGGCCCAGAACATGGTGCCTTCTTGGCATTGGGGTCCAGCCCAGGAAAAATTGAGGTGTGCCACTGGATTTTCGAGAACGACATGACGTGGACCACTGCTCATTAA 390 0.4744 MVEFAVMVLGPNVVVRTTESVNGSGRSMMIGKVYAVDGGKVTKSVSCHQSLYPYLLYYCHSVPKVRVYEADILDVDTKVKINHGVAICHLDTSAWGPEHGAFLALGSSPGKIEVCHWIFENDMTWTTAH. 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03089 129 SMART BURP_2 1 128 IPR004873 -
Seca4g03089 129 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 1 128 - -
Seca4g03089 129 ProSiteProfiles BURP domain profile. 1 128 IPR004873 -
Seca4g03089 129 Pfam BURP domain 1 126 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03089 Seca-Chr4 53029143 53029532 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03089 - - gmx:100784264 244.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g03672 12 93832006 93834268 Seca4g03089 4 53029143 53029532 ECH
Seca4g03089 4 53029143 53029532 Seca4g03089 4 53029143 53029532 ECH