Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03080 ATGGCTACTCAATCACCTTCTCCTCCTATTCCTACTGGTCAAAATACAGGTGCTGAAATTGTGCAACCTACAAATGTGGATCAGCACAATTCCGGAGAAGGGCTTGTTAAACAGAGCTCATCCACATCAGTCTTTGTGAACTCAGAACCAATGCGGGAGGAACAAGTTCAGAATGCGGTGAAATTTTTGTCACACCCGAAAGTTAGAGGCTCTCCTGTCATATACAGGCGATCCTTCCTGGAGAAGAAGGGCCTCACAAAGGAGGAGATAGATGAAGCCTTTCGGCGTGTGCCTGATTCACCTTCAAGTGTGCAGACAACTGGTGTAAATCAAGATGGACAATTGAAGCCATCATCAGATATTCAGCAGCAAGGCCAATCACAGGCTTTGCAACCCGTCGTATCTCCTTCTGGTGGTGTTACTACTTCATTGGGAACATTATCACGCCAGAGTTTTCGCTGGTCACATGCCCTTGTCACAGTAGGATTATTGGTTGTTTCAGGTGCTGGAACAGCTATGCTAATTAAGAAATCTGTTATTCCATGGTTAAAATCTTGGATACGCAATATTGTCTTAGAAGAAGAATGTGACCAATTAAAGAGAACAGTCTCAAAACCAACATTGGCAGAAGAAGCTGCAGAGGCTGCAAAAGCAGCTGCAGCTGCAGCAGTAGATATGGCTAAAGCTAGCCACGAAATACTGAGTTCAAAAAGTGAAGAGAAAAGATACTTTGTGGAAGTTGTGAGCCTTTTAGATAAGCAAGTGCAAGAAATGAAGTTAATGACTAACTCGATAAGAAGATTGGAAGCTTCTACTGGACGCTCCATCTCAAAGCAAGAAGATCCCTATGTCACTCAAACAAGTTCAAAGATACAGCAATTGGTTGTAAATGGAAAGGCAGACTACCAGTTTCCCTCAGTGAAATCTTCATCCCCTCCTGCTTCTGTTGAACCATCTAGTGCTCCTCATCCAAAGTCATATATGGAGGTAAATCATTGTCTTGCTGTTTTTATTCCCCCTGCCACCCCTCGTCATGAGGCAATATCTAAGTGCTTGTTATTTCCATGTATAATGGCCATGATCCAAAGAGGGGAGAAGCCTTCTAACATCAGAGATATTGATGATTCACCTCCCAACCCTTATCAGCAACCATCAAATCCTCGCTTAGCACCTAGAGTCAAGCCTTGGGAAGTTAGTCAGGTGCAAAGCACCTCTACCCAAGTCTTTCACTCTCAAGTAAATGGCAAGGAACAAGATAATGGTGACAACCCAGTGCCTTGGTTACAAACAAAAAATGTCAGAATCAAAGAGATAGATAATGAAATTGAGTTTAATGGAGCACCTGCTGCACTCAATCAGAAGCCAGTCCAACGTATGTGGGTTCCCCCTCAACCTCCCCCCGTAGCTATGCCTGAGGCTGCAGAAGCAATCAGACGCCCAAAGCCAGTGGTACAGAAGGAATCGATGCCAGATGATCAATCAGTAGCTCAGTCTTCAGACATCTCTGATGGAGTGGAGGGGATCTCAAAACAATTCAAATCTGAAGGTACAATTGAAGGCAGTAAGATCAACCCACTTCTCAGCTCTAGTGAGATCCAAGATTATGAAGTCAATAATGAAGAGCAGTGA 1629 0.4383 MATQSPSPPIPTGQNTGAEIVQPTNVDQHNSGEGLVKQSSSTSVFVNSEPMREEQVQNAVKFLSHPKVRGSPVIYRRSFLEKKGLTKEEIDEAFRRVPDSPSSVQTTGVNQDGQLKPSSDIQQQGQSQALQPVVSPSGGVTTSLGTLSRQSFRWSHALVTVGLLVVSGAGTAMLIKKSVIPWLKSWIRNIVLEEECDQLKRTVSKPTLAEEAAEAAKAAAAAAVDMAKASHEILSSKSEEKRYFVEVVSLLDKQVQEMKLMTNSIRRLEASTGRSISKQEDPYVTQTSSKIQQLVVNGKADYQFPSVKSSSPPASVEPSSAPHPKSYMEVNHCLAVFIPPATPRHEAISKCLLFPCIMAMIQRGEKPSNIRDIDDSPPNPYQQPSNPRLAPRVKPWEVSQVQSTSTQVFHSQVNGKEQDNGDNPVPWLQTKNVRIKEIDNEIEFNGAPAALNQKPVQRMWVPPQPPPVAMPEAAEAIRRPKPVVQKESMPDDQSVAQSSDISDGVEGISKQFKSEGTIEGSKINPLLSSSEIQDYEVNNEEQ. 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03080 542 MobiDBLite consensus disorder prediction 368 390 - -
Seca4g03080 542 MobiDBLite consensus disorder prediction 490 505 - -
Seca4g03080 542 Pfam Family of unknown function (DUF5572) 354 398 - -
Seca4g03080 542 MobiDBLite consensus disorder prediction 97 138 - -
Seca4g03080 542 Coils Coil 251 271 - -
Seca4g03080 542 Gene3D - 44 107 IPR036388 -
Seca4g03080 542 MobiDBLite consensus disorder prediction 99 138 - -
Seca4g03080 542 MobiDBLite consensus disorder prediction 480 542 - -
Seca4g03080 542 Pfam Pex14 N-terminal domain 52 96 IPR006785 -
Seca4g03080 542 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14 1 514 IPR025655 GO:0005515|GO:0005778|GO:0016560
Seca4g03080 542 FunFam Peroxisomal membrane protein PEX14 44 106 - -
Seca4g03080 542 MobiDBLite consensus disorder prediction 514 535 - -
Seca4g03080 542 MobiDBLite consensus disorder prediction 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03080 Seca-Chr4 52868637 52874109 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03080 K13343 - gmx:100807229 672.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01542 12 16259264 16262531 Seca4g03080 4 52868637 52874109 PCT