Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01542 ATGGAACAAAATATATCTTCTGATGAACACTCTGTCTCAGGGCAAGAAGATCTGAGAGTCAGTCAAACAAATTCGAAGCAAATGATTGTGAATGGCAAGGCTGACTATGACTTGAGATCAGTGAGATCTTTATCCCCACCTGCATCTGTTGAACCACCAAGTGGTCTTCATCCAAAGTCATATACGGAGGTAGTAATTTTCTTTGCATCTATAATAATCTGTTTTGCACCCCCTGACTTGCCTTTTACTTATGGGTTATATCTGAATGCTTGTCATCTTAAGCAATGTCTTGAAGAAGATTATGGTGTACAAATAAGATTGCTCTTCTATATTGGGTTTACCAACTTTATGTGGCCAGTTACTTTTATAAAACTCTGGGTGTTAATGCAGGATATCAATGATTTACCCCCAAACCCTAGTCAACAACCATCAAATCCTCGCTTAGTGCCTAGATCCAAGCCTTGGGAGGTTAGTCAGGTGCAACACACTTCTACTACTCAAGTGCTTCAGTCTCAAGTAAGTGGTGAAGACTTGAATATCAAGGTCCAAGATACCACTCAATCAAATGGTGATGACCCAGTGCCCTGGTGGCAGAGGAAAAATGTTAGAATTAGAGAAATTGATGAAAATGAGTATAATGGAGCACCTTATAGTGCTGCATCTGCATCCAGTCAACAGCCAGTACAACGTGTGTGGGTTCCTCCTCAACCTCCCCCCATAGCTATGCCGGGGGCTGCTGAAGCAATCAGACGCCCAAAGCCGGCGGCCCAAAAGGAACAGATGTCAGATAATCAGTCAGTAGGTCATTCTTCAGACACCTCTGATGAGGTGCAAAGGATCCCAAAGCCATCGGAATCTGAAGGAGCTGTAGAAGGCAGCAATGCCAGCTCACTTCTAAGCTCTGGTGAGATACAAGAAGACCATGAAGTCATGTATGAAGAGAAATGA 948 0.4314 MEQNISSDEHSVSGQEDLRVSQTNSKQMIVNGKADYDLRSVRSLSPPASVEPPSGLHPKSYTEVVIFFASIIICFAPPDLPFTYGLYLNACHLKQCLEEDYGVQIRLLFYIGFTNFMWPVTFIKLWVLMQDINDLPPNPSQQPSNPRLVPRSKPWEVSQVQHTSTTQVLQSQVSGEDLNIKVQDTTQSNGDDPVPWWQRKNVRIREIDENEYNGAPYSAASASSQQPVQRVWVPPQPPPIAMPGAAEAIRRPKPAAQKEQMSDNQSVGHSSDTSDEVQRIPKPSESEGAVEGSNASSLLSSGEIQEDHEVMYEEK. 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01542 315 MobiDBLite consensus disorder prediction 258 274 - -
Seca12g01542 315 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14 130 309 IPR025655 GO:0005515|GO:0005778|GO:0016560
Seca12g01542 315 MobiDBLite consensus disorder prediction 1 20 - -
Seca12g01542 315 MobiDBLite consensus disorder prediction 216 230 - -
Seca12g01542 315 MobiDBLite consensus disorder prediction 289 303 - -
Seca12g01542 315 MobiDBLite consensus disorder prediction 215 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01542 Seca-Chr12 16259264 16262531 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01542 K13343 - gmx:100784152 205.682
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01542 12 16259264 16262531 Seca12g01542 12 16259264 16262531 ECH
Seca12g01542 12 16259264 16262531 Seca4g03080 4 52868637 52874109 PCT