Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03009 ATGATAGAAACGGCAGAGAAGACAGGTATTCAAGGAAGAATTATAAACGTTTCTTCTGTCATCCATAGCTGGGTGAAGAGAGATGGTTTTCGTTTCAACGACATACTCAGTGGAAAAAACTATAATGGCACACGCGCTTATGCTCAGTCAAAATTGGCCAGCATTTTGCATGCCAAGGAAATAGCTCGACAGCTCAAGGCAAGGAATGCAAGAGTAACTATCAATGCAGTGCATCCAGGCATTGTGAAGACGGGAATTATTAGAGCTCATAAGGGCTTAATAACGGATTCCTTATTTTTCATCGCATCAAAGTTACTCAAATCGACATCACAGGGTGCATCAACTACGTGTTATGTGGCTCTGAGTCCAAAAACAGAAGGGATAAGTGGGAAATACTTTACAGATTGTAATGAGAGCAAGTGCTCAAGCCTAGCAAATGACGAATCAGAAGCTCGGAAGCTATGGAACAACACCCATGCCTTGCTTCACAAACGACTGCGTCAAGCAACAAAATGA 516 0.4225 MIETAEKTGIQGRIINVSSVIHSWVKRDGFRFNDILSGKNYNGTRAYAQSKLASILHAKEIARQLKARNARVTINAVHPGIVKTGIIRAHKGLITDSLFFIASKLLKSTSQGASTTCYVALSPKTEGISGKYFTDCNESKCSSLANDESEARKLWNNTHALLHKRLRQATK. 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03009 171 Gene3D - 2 167 - -
Seca4g03009 171 PANTHER RETINOL DEHYDROGENASE 1 161 - -
Seca4g03009 171 PRINTS Glucose/ribitol dehydrogenase family signature 70 87 IPR002347 -
Seca4g03009 171 PRINTS Glucose/ribitol dehydrogenase family signature 6 22 IPR002347 -
Seca4g03009 171 PRINTS Glucose/ribitol dehydrogenase family signature 47 66 IPR002347 -
Seca4g03009 171 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 140 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03009 Seca-Chr4 51633515 51634972 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03009 - - gmx:100799729 319.701
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03009 4 51633515 51634972 Seca4g03009 4 51633515 51634972 ECH
Seca12g01598 12 17234738 17237796 Seca4g03009 4 51633515 51634972 PCT