Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02967 ATGCAAGACTCAATTGGGATCCCTGCTTGCTTCTCTTCTTCAGAGAAGCCAAGTGATGATCATGGAGCAACTGTGACCCGTTCAGGTCAGAGTGTTTACATGTCTGTATATAGAACAAAGATTGCTGATCAGTGCCGCTTGATCACCATCACATGGTGCAAAAACTTGTTGCTTCATGGTCTCTCAGTATCAGTGGAAGGCCCAGAAGGGGAAACCCAACATAGCTGCAAGGTTGAGCTAAAGCCATGGTACTTTTGGAGGAAACAAGGTTCCAAGCGCTTCATAGTAGATGGTAAAACAGTTGACATCTTCTGGGACCTTAAAAATGCAAAATTTCATGGTGAAACAGAACCAACCTCAGAGTACTATGTAGCAGTGGTTTGTGGTCAAGAGGTTGTTCTGCTTCTTGGTGATCTCAAAAAAGATGCCTATAGAAGAACAGGATGCAGGCCAGCTCTTATTGATCCAATTTTGGTTTCAAGAAAAGAACACATCTTTGGGAAGAGAAAATTCTCAACTAGAGCTAAATTCCATGAGAAAGGTAGGTGCCATGAGATCACAATTGAGTGCAAGAACAAGGGCAATGGAGATGGAAACTCATTGAATGGGGTTCAGCCAGAGATGGAGATAAGATTTGATGGGCACTTGGTGATCCATGTCAAGCACTTGCAATGGAAATTTAGAGGCAATGAGTCAATTCATCTCAACAAAATGAGAGTAGAGGTATATTGGGATGTTCATGATTGGCTATTTAGTCCTGGTTTAAAACATGCTTTATTCATTTTTAAGCCAATTTTTTCATCAACATCTATGTCTTCATCACTAGCTTCATCTTCACCTCCATTATCATCCTCATCCACTCCATTATCAAGTTCTGGGTCAGTGGAGGGACGTAGTGTCAGTGAGTCATCATCATCATCATCATCAGAGTTTTGCTTGTTTCTATATGCTTGGAAGATTGAGTGA 966 0.413 MQDSIGIPACFSSSEKPSDDHGATVTRSGQSVYMSVYRTKIADQCRLITITWCKNLLLHGLSVSVEGPEGETQHSCKVELKPWYFWRKQGSKRFIVDGKTVDIFWDLKNAKFHGETEPTSEYYVAVVCGQEVVLLLGDLKKDAYRRTGCRPALIDPILVSRKEHIFGKRKFSTRAKFHEKGRCHEITIECKNKGNGDGNSLNGVQPEMEIRFDGHLVIHVKHLQWKFRGNESIHLNKMRVEVYWDVHDWLFSPGLKHALFIFKPIFSSTSMSSSLASSSPPLSSSSTPLSSSGSVEGRSVSESSSSSSSEFCLFLYAWKIE. 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02967 321 MobiDBLite consensus disorder prediction 277 309 - -
Seca4g02967 321 PANTHER EXPRESSED PROTEIN 7 319 IPR008586 -
Seca4g02967 321 Pfam Plant protein of unknown function (DUF868) 28 319 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02967 Seca-Chr4 50779572 50780537 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g02967 7 321 EF-hand Containing Proteins AT5G28150 37.421 7.54e-69 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02967 - - gmx:100779755 516.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02967 4 50779572 50780537 Seca4g02967 4 50779572 50780537 ECH
Seca12g01638 12 17694901 17695833 Seca4g02967 4 50779572 50780537 PCT