Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01638 ATGATGCAAGACTCAAATGGGATTCCTGCTTGCTTTTCTTCTGCAGAGAAGCTGAGTGATGATCATGGAGCTGTGACCCGTTCAGGTCAGAGTGTTTACATGTCTGTATATAGAACAAAGGTTGCTGATCACTGCCGCTTGATCACCATCACATGGTGCAAAAATCTGTTGCTTCATGGCCTATCAGTATCAGTGGAAGGTCCAGAAGAAGAAGCTCAGTATACCTGTAAGGTTGAGCTAAAGCCATGGTACTTTTGGAGGAAACAAGGTTCCAAGCGTTTCATAGTAGATGGTAAAGCTGTGGATATCTTCTGGGACCTTAAAGCTGCAAAATTTAATGGCGAAACAGAACCAACCTCAGAATACTATGTGGCAGTGGTTTGTGATGAAGAGGTTGTACTTCTTCTTGGTGATCTAAAGAATGAAGCCTACAGAAGGACAGGGTGTAGGCCAGCACTTATTGATCCAATTTTGGTCTCAAAAAAGGAGCACATATTTGGGAAGAAGAAATTCTCTACTAGAGCAAAGTTCCATGAGAAGGGTAGGTGGCATGAGATCTCAATTGAATGCAAGAACAGGGGCAGTGGAGATTCTGTAAGTGGGGTTCAGCCAGAGATGGAGATAAAGATTGATGGGCACTTGGTCATTCATGTCAAGCACTTGCAATGGAAATTTAGAGGTAATGAGTCAATTCATCTTAGCAAAATGAGAATAGAGGTATATTGGGATGTTCATGATTGGTTGTTTAGTCCTGGTTTAAAACATGCTTTATTCATTTTTAAGCCAATTTTGTCATCTTCATCACCACCGTTATCATCCTCATCATCGCCTCCATTATCAACTAGGACAAGGAGTTCTGAATCAGTGGAGGGATTTAGTGTTAGTGGGTCATCAGAGTTTTGCTTGTTTCTCTATGCTTGGAAGGTTGAATGA 933 0.4159 MMQDSNGIPACFSSAEKLSDDHGAVTRSGQSVYMSVYRTKVADHCRLITITWCKNLLLHGLSVSVEGPEEEAQYTCKVELKPWYFWRKQGSKRFIVDGKAVDIFWDLKAAKFNGETEPTSEYYVAVVCDEEVVLLLGDLKNEAYRRTGCRPALIDPILVSKKEHIFGKKKFSTRAKFHEKGRWHEISIECKNRGSGDSVSGVQPEMEIKIDGHLVIHVKHLQWKFRGNESIHLSKMRIEVYWDVHDWLFSPGLKHALFIFKPILSSSSPPLSSSSSPPLSTRTRSSESVEGFSVSGSSEFCLFLYAWKVE. 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01638 310 Pfam Plant protein of unknown function (DUF868) 28 308 IPR008586 -
Seca12g01638 310 PANTHER EXPRESSED PROTEIN 8 308 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01638 Seca-Chr12 17694901 17695833 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g01638 8 310 EF-hand Containing Proteins AT5G28150 37.785 3.04e-69 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01638 - - gmx:100779755 544.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01638 12 17694901 17695833 Seca12g01638 12 17694901 17695833 ECH
Seca12g01638 12 17694901 17695833 Seca4g02967 4 50779572 50780537 PCT