Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02965 ATGGTGTCTGCTACTGGGGTAGCTACTGCACAGCCTCTTTTTTCTTTTGGATTGATTTCTGATGTCCAATATGCTGACATTCCTGATGGTCGCTCATTCCTTGGTGTTCCACGGTATTATAGGCATAGTATTCTTGTATTGCAGAGAGCAGTTAAAGAATGGAATACTCATCAGAAGCATAAGTTTGTGATCAATTTAGGAGATATTGTTGATGGGTTTTGTCCCAAAGATCAATCTCTTAATACTGTAAAGAAAGTTGTGGATGAATTTGAGGTGTTCAAGGGACCCGTGTATCATATGATTGGCAATCACTGCCTGTACAATCTTCCTCGAAGTAAGTTACTTCCATTATTGAAGATCCAAGCTCTTGATGGCCGTGCTTACTATGATTTCTCACCAGTGCCTGAATATAGATTTGTAGTTCTTGATGGCTATGACATCAGTGCCATTGGTTGGCCTCAAGATCATCCAAGAACATTGGAGGCCTTGAAACTCCTTAGGGAGAAGAACCCAAATGAAGATAAGAACAGTCCAACAAATTTGGAGGGGCTTGAAAGAAGGTTTCTTATGTTTAATGGAGCCGTTGGAAAGGAACAGATGGAATGGTTGGATGGTGTTCTCCAGGAGGCAACACAATTGAAACAGAAGGTGGTTGTCTGTTGCCATCTGCCTCTAGATCCTGGTGCATCAACTGAGGAGGCACTATTGTGGAATTATGATGAAGTTATGAATCTGATACACAGATACAATTGTGTTAAGGTCTGTCTTGCTGGACATGATCATAAAGGTGGGTACTCCATTGATTCTTATGGGGTACACCATAGAGTTCTTGAAGCTGCTCTGGAATGTCCTCCTGGCACAGATGCATTTGGAAGCGTTTATGTCTATGATGACAGGATATCACTTGTCGGAACCGACAGAATGGAGAGTACAGATATCCACTTTAATCCCTAA 954 0.4172 MVSATGVATAQPLFSFGLISDVQYADIPDGRSFLGVPRYYRHSILVLQRAVKEWNTHQKHKFVINLGDIVDGFCPKDQSLNTVKKVVDEFEVFKGPVYHMIGNHCLYNLPRSKLLPLLKIQALDGRAYYDFSPVPEYRFVVLDGYDISAIGWPQDHPRTLEALKLLREKNPNEDKNSPTNLEGLERRFLMFNGAVGKEQMEWLDGVLQEATQLKQKVVVCCHLPLDPGASTEEALLWNYDEVMNLIHRYNCVKVCLAGHDHKGGYSIDSYGVHHRVLEAALECPPGTDAFGSVYVYDDRISLVGTDRMESTDIHFNP. 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02965 317 CDD MPP_Nbla03831 14 302 IPR041869 -
Seca4g02965 317 Gene3D - 9 308 IPR029052 -
Seca4g02965 317 PANTHER - 6 316 - -
Seca4g02965 317 SUPERFAMILY Metallo-dependent phosphatases 12 313 IPR029052 -
Seca4g02965 317 Pfam Calcineurin-like phosphoesterase 15 262 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02965 Seca-Chr4 50767533 50770760 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02965 K01517 - gmx:100792911 587.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02965 4 50767533 50770760 Seca4g02965 4 50767533 50770760 ECH
Seca4g02965 4 50767533 50770760 Seca12g01641 12 17712921 17713883 PCT