Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01641 ATGGGTTCTGCTAATGGACTAGATACTGCACTTGGGAAACAGCCTCTCTTTTCGTTTGGATTGATATCTGACGTCCAGTATAGTGACATTCCTGATGGTCGTTCATTCCTTGGTGTCCCGCGGTACTATAGGCATAGCATTCTTGTGTTACAGAGAGCAGTGAAAAAATGGAATACTCATCAGAGGCATAAGTTTGTAATAAATTTTGGTGATATTGTTGATGGATATTGTCCAAAAGATCAATCTCTTAAAACTGTAAAGAAAGTAGTGGATGAATTTGAGACGTTCAAGGGACCAGTGTATCATTTGATTGGCAATCACTGCCTATACAATCTGCCTCGCAGCAAGTTACTTCCATTATTGAAGATCCATAGTCTTGGAGGACATGCTTATTATGATTTTTCACCAGTGCCCCAATATAGATTTGTAGTTCTTGATGGCTATGACATAAGTGCCATTGGTTGGCCTCAAGATCATCCTAGAACATTGGAGGCCTTTAAATTCCTCCGGGAAAAGAATCCAAATGAAGATAAGAACAGTCCAACAGGTTTGGTGGGCCTTGAAAGAAGGTTTCTTATGTTCAATGGAGCTGTTGGAAAGGAGCAAATGGAATGGTTGGATGGTGTTCTTAAGGAAGCAACAAAACTGAAACAAAAGGTGGTTGTCTGTTGCCATCTGCCTCTAGATCCTGGTGCATCATCCAAGGAAGCACTGTTGTGGAATTATGATGAAGTAATGAATTTGATACACAGATACAATTGTGTGAAGGTGTGTCTATCTGGACATGATCATAAAGGTGGATACTCCATTGATTCCCATGGAGTACACCATAGAGTTCTTGAAGCTGCCTTGGAATGTCCTCCTGGCACAGATGCATTTGGATATGTTGATGTTTATGATGACAGAATATCACTTCATGGTATGGATAGAATGCAGAGTACAGACATGTGTTTTAAATTCTAG 963 0.4019 MGSANGLDTALGKQPLFSFGLISDVQYSDIPDGRSFLGVPRYYRHSILVLQRAVKKWNTHQRHKFVINFGDIVDGYCPKDQSLKTVKKVVDEFETFKGPVYHLIGNHCLYNLPRSKLLPLLKIHSLGGHAYYDFSPVPQYRFVVLDGYDISAIGWPQDHPRTLEAFKFLREKNPNEDKNSPTGLVGLERRFLMFNGAVGKEQMEWLDGVLKEATKLKQKVVVCCHLPLDPGASSKEALLWNYDEVMNLIHRYNCVKVCLSGHDHKGGYSIDSHGVHHRVLEAALECPPGTDAFGYVDVYDDRISLHGMDRMQSTDMCFKF. 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01641 320 PANTHER - 11 319 - -
Seca12g01641 320 Pfam Calcineurin-like phosphoesterase 18 265 IPR004843 GO:0016787
Seca12g01641 320 SUPERFAMILY Metallo-dependent phosphatases 15 314 IPR029052 -
Seca12g01641 320 CDD MPP_Nbla03831 17 305 IPR041869 -
Seca12g01641 320 Gene3D - 12 311 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01641 Seca-Chr12 17712921 17713883 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01641 K01517 - gmx:100808714 601.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01641 12 17712921 17713883 Seca12g01641 12 17712921 17713883 ECH
Seca4g02965 4 50767533 50770760 Seca12g01641 12 17712921 17713883 PCT