Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02943 ATGATGAGTGGGCATGATGAGAGCGTGCGAAGGAAAAGTGTAGAAAGGAAGAAAGAGCGAGAAAAAAGAGAAATGAGTGTGCACTTCTACTACTACCCTTCTTTCCCTGCCTTGGCCTATGCCTATGGTTGCCGCTACTCTTATGCTGCAAGTGCAACACCCATTCACTCTCTCTGCTTCTCCCACCACCGTCCTACTCCTACACCTCACTCTTCCATCACCAAATTCTCCTTCTTCCAAAACCCTAATTTCCTCACGGGGAACACTCTCTTCCTTAGGATGCAGCGATTCTGCTCTGTGAGTGGAATCAGTAAGAACAAAGCAATGGTGGAGAGGTTGCAACGTTATGGAGTAATCACTTCAAGTAAGGTTGCTGAAGTAATGGAGAGCGTTGATAGAGCTTTGTTTGTTCCCGATGGATCGGCAGCTTATGATGACAGCCCCATGTCCATAGGTTACAATGCTACTATATCTGCACCGCACATGCATGCCACCTGCCTTCAGTTGCTGGAAGAGAATTTGCATCCTGGAATGCATGCTCTCGACATTGGCTCTGGAACAGGGTATTTGACTGCATGCTTTGCATTGATGGTTGGACCCCAAGGCCGTGCTGTTGGTGTGGAGCATATTCCTGAATTGGTTTCTTTTTCAATAGAGAATATTCAGAAAAGTGCTGCAGCTACACTATTGAAAGATGGTTCCCTTTCCGTTCATGTTGGTGGTATGATTTCTGAAACTTCTGAGCATATAAAAGATTGA 759 0.4572 MMSGHDESVRRKSVERKKEREKREMSVHFYYYPSFPALAYAYGCRYSYAASATPIHSLCFSHHRPTPTPHSSITKFSFFQNPNFLTGNTLFLRMQRFCSVSGISKNKAMVERLQRYGVITSSKVAEVMESVDRALFVPDGSAAYDDSPMSIGYNATISAPHMHATCLQLLEENLHPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVSFSIENIQKSAAATLLKDGSLSVHVGGMISETSEHIKD. 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02943 252 Gene3D Vaccinia Virus protein VP39 100 251 IPR029063 -
Seca4g02943 252 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 100 242 IPR000682 GO:0004719|GO:0036211
Seca4g02943 252 Pfam Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 105 239 - -
Seca4g02943 252 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 106 226 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02943 Seca-Chr4 50568045 50570417 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02943 K00573 - gmx:100810913 338.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02943 4 50568045 50570417 Seca4g02943 4 50568045 50570417 ECH
Seca12g01657 12 18024344 18027046 Seca4g02943 4 50568045 50570417 PCT