Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02084 ATGGCTACGTCTTCTCCTCTACACTTACCCGAACTCCATTTTCTTTCTCCCCAAATCACCCCCAAGTGTCGTCTTTCCCTCTCTAAATTTCCCTCCTCTACTGTTACCACCACGCGAATCCAAGCCGTCAAAGAAGAATCCGCGTTGGCCGAGCGAGTGAACGACGTGGAGTGGAGTGGAAACAGTGTTGCTGCTGCCAGCGGAAGAAATGACAGTGGCAATGGCGCCATTGAGGGATACGTTAACGGCACCACCAACGGAAGCATGGTGAAGTTTGATTATGTGGTGGAAGTTGAAGCCTCCAAGCTGAACGAGGATGGGAGGAAGATAAGGTTGGAGGAGATTGGAAAAGAAGATGCGTGGTTTAAACAAATCGGGAAAGAACGAGTTGAGGTAGCAGTTGCACCTGGAGGTCGATGGAGCAGATTCAAAACTTACTCCACGATCCAGAGAACCTTGGAAATTTGGGGATTTGTTATAACATTCATCTTTAAGGCTTGGCTAAACAACCAGGAGTTCTCTTACAAAGGAGGAATGACTGAGGAAAAAAAGACCTTAAGGCGGAAGACCCTTTCCAAGTGGCTGAAGGAAAGCATTCTGAGATTAGGTCCTACATTCATTAAAATTGGCCAGCAATTCTCCACTAGGGTGGACATTCTTCCTCAAGAATTCGTTGACCAATTGTCCGAACTTCAGGATCAAGTTCCTCCGTTTCCCTCAGAGACTGCAATAGCTATTGTCAAAGAAGAGCTTGGAGCTCCTTTAGGTGATATCTTTGATCAGTTTGACTATGAACCAATAGCTACTGCTAGTCTTGGTCAGGTTCATCGTGCAAGATTAAAGGGACATGAGGTTGTTGTTAAAGTGCAAAGGCCTGGTCTCAAGGATCTTTTTGATATTGATCTTAAAAACCTGAGGGTTATTGCTGAATATCTTCAAAAAGTTGATCCAAAATCAGATGGTGCAAAGAGGGACTGGGTTGCTATTTATGATGAATGTGCCTCTGTCTTGAATCAGGAGATAGACTACACCAAGGAAGCTGCTAATGCGGAATTGTTTGCTAGTAACTTTAAGAACATAGATTATGTGAAAGTTCCTACAATCTACTGGGATTATACCACGCCACAGATTCTGAAAATGGAGTATGTTCCAGGGATTAAAATAAACAAAGTACAAGCTTTAGATCAGTTGGGTGTTGACCGAAAAAGGTTAGGGAGATATGCAGTTGAGTCATACTTGGAACAAATTTTGTCACATGATTTCTTCCATGCTGACCCTCATCCTGGAAATATTGTCGTTGATGATGTCAATGGTGGAAGATTGATCTTCTATGATTTTGGAATGATGGGAAGTATCAGTCCAAACATCCGAGAAGGTTTGCTCGAAGCATTTTATGGAGTTTATGAGAAAGATCCAGATAAGGTTCTTCAATCAATGATTCAAATGGGTGTTCTTGTCCCTACCGGAGATATGACTGTTGTTAGGCGAACAACACAATTCTTCCTGAACAGTTTTGAGGAGCGTCTGGCTGCACAACGGATAGAGAGAGAGGAAGCAACAGCTGAACTTGGATTCAAAAAACCATTAAGCAAAGAGGAAAAAATATTGAAGAAGAAAGAACGTCTGGCTGCAATTGGGTGA 1641 0.429 MATSSPLHLPELHFLSPQITPKCRLSLSKFPSSTVTTTRIQAVKEESALAERVNDVEWSGNSVAAASGRNDSGNGAIEGYVNGTTNGSMVKFDYVVEVEASKLNEDGRKIRLEEIGKEDAWFKQIGKERVEVAVAPGGRWSRFKTYSTIQRTLEIWGFVITFIFKAWLNNQEFSYKGGMTEEKKTLRRKTLSKWLKESILRLGPTFIKIGQQFSTRVDILPQEFVDQLSELQDQVPPFPSETAIAIVKEELGAPLGDIFDQFDYEPIATASLGQVHRARLKGHEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKVDPKSDGAKRDWVAIYDECASVLNQEIDYTKEAANAELFASNFKNIDYVKVPTIYWDYTTPQILKMEYVPGIKINKVQALDQLGVDRKRLGRYAVESYLEQILSHDFFHADPHPGNIVVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGVYEKDPDKVLQSMIQMGVLVPTGDMTVVRRTTQFFLNSFEERLAAQRIEREEATAELGFKKPLSKEEKILKKKERLAAIG. 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02084 546 Pfam ABC1 atypical kinase-like domain 230 478 IPR004147 -
Seca4g02084 546 PANTHER CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED 103 513 - -
Seca4g02084 546 Coils Coil 502 522 - -
Seca4g02084 546 CDD ABC1_ADCK3-like 231 479 - -
Seca4g02084 546 SUPERFAMILY Protein kinase-like (PK-like) 232 474 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02084 Seca-Chr4 35333621 35347390 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02084 - - gmx:100791330 919.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02084 4 35333621 35347390 Seca4g02084 4 35333621 35347390 ECH
Seca4g02084 4 35333621 35347390 Seca8g02968 8 82577315 82584859 PCT