Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01961 ATGGATCATTCCTTTCGCCGGCGACGCCGAACATGGTGTTGCTCTTTCGCGGTTCCACCCTCCAGCCCTGACAACCCTCCCTCTAAACCCCACCGTAGGCCCAACTCCCAGGCCCAATCCAAGCCCAGTTTCTCCGTCCCAAGCTCCCCTCAGAGCGCAAAATCCGCATCCCGCATCGTGGGTCGGATCGACCCTCGCCGGATCTTGTCTCCCGGAAGGGTATCACCCATCGAAGATGCTGTCCCTGATCCCTCTCCGGTTCTCGATTCCGTGCCCCAGTTGCGATCTCAGAGCTTCCGTGCACCCATCGCCGCCCCCACCGCCCCTCCGGCGGGGAACTCCGCCGTCAGTGATGGGTTTGACGTGAGAATGAGTTTGAGAGGGAAGAATGGTGGGTGCGTTGTTCTGGAGCTGAACTCGGCTGTTCTGTGCGCTAACTCGGAGGTTTTTGCTGGGTTAATTGCGGATTACAGAAAAGGGGTTTCGTCCTCGAGTGGTAGTAACAAAATGTGTAGAATAGAGGTGCCTGAAGTCGATAACTTGGGAGTGTTTAGAGAAACCATTGAGCTTATGTTCGAAGAGGATGTTACCAAAAGGCTCCTCAACATTGGTGTTTATCGATCCATTGACGTTTTGGAGGTTTCGGCAGGCATCATGTTCACTAAGGGTGTTTTGTCCTGTTTACGGTACCTGGAGGCTGTTCCTTGGACTGAAGAAGAGGAAGAAAAATTGAGGAGCCTATTCACAAGATTTAAGTTTGATGATGAAACAACAAGAGACATTCTAGCAAGGCTTTACTTAAACGATTCAGTAGATTCCCAGCCAAATGTAGCCCAACAACTTGTTTGGTCTATAACAACCTGTGTGGATGCCAATGCAAGAAATGAATTGAAGTCACTAGTCAAGGGTCTTCTTTGCAAAAGCTCAGTCTATGAGAAGAACCATCTTGACCTCAGCAAGGAGGATCTATATTCTGTTTGCCACTCATGTCTAGGTTCACTGGTTAGCCTCTTTGAGGAGGCATCTGACACCATCCCTCCTGAAAGGTTGACAAAGAAAGATATGAATAAACCGCTGATCGAACGCATCTCAAGAGAGGTTGACAACATAAACTGGTTGCTGGAAATCATGCTTGATGGTCAAATAGCAGAGGACTTTGTGGATATATGGGCAGATCAGCACCAGCTTCTTAAAATGCATGAGAATGCATCCCCCATGATTAGATATGAACTCAGTAGAGTGTCAGCAATTCTGTTTGTTGCCATGGCTACCAGAAAATTACAATGCCGGTTGGAAGCTAGATCAGGGCTTCTTCAGGCATGGTTTAGACCTATGCTTTTGGACTTTGGTTGGCTGCAGAGATGCAGAAAAGGGCTTGATATAAAGGTCTTGCAAGAGGCCATGGGTCAGACACTTCTTACTCTCCCACTAAAGCAACAGTACATGCTGTTCATGGAATGGTTTCGGTACTTTTCTAGCCATGGCACTGAATGTCCAAATCTAAGCAAGGCATTCCAAATTTGGTGGCGCAGATCATTTTTAAGAGGCTCTGAAACTTATGCAGTTGAATCAAGGTAA 1578 0.4785 MDHSFRRRRRTWCCSFAVPPSSPDNPPSKPHRRPNSQAQSKPSFSVPSSPQSAKSASRIVGRIDPRRILSPGRVSPIEDAVPDPSPVLDSVPQLRSQSFRAPIAAPTAPPAGNSAVSDGFDVRMSLRGKNGGCVVLELNSAVLCANSEVFAGLIADYRKGVSSSSGSNKMCRIEVPEVDNLGVFRETIELMFEEDVTKRLLNIGVYRSIDVLEVSAGIMFTKGVLSCLRYLEAVPWTEEEEEKLRSLFTRFKFDDETTRDILARLYLNDSVDSQPNVAQQLVWSITTCVDANARNELKSLVKGLLCKSSVYEKNHLDLSKEDLYSVCHSCLGSLVSLFEEASDTIPPERLTKKDMNKPLIERISREVDNINWLLEIMLDGQIAEDFVDIWADQHQLLKMHENASPMIRYELSRVSAILFVAMATRKLQCRLEARSGLLQAWFRPMLLDFGWLQRCRKGLDIKVLQEAMGQTLLTLPLKQQYMLFMEWFRYFSSHGTECPNLSKAFQIWWRRSFLRGSETYAVESR. 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01961 525 MobiDBLite consensus disorder prediction 15 88 - -
Seca4g01961 525 MobiDBLite consensus disorder prediction 31 56 - -
Seca4g01961 525 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 119 516 IPR038920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01961 Seca-Chr4 32928783 32932109 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01961 - - gmx:100777771 796.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01961 4 32928783 32932109 Seca4g01961 4 32928783 32932109 ECH
Seca12g06517 12 157175522 157178286 Seca4g01961 4 32928783 32932109 PCT