Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06517 ATGGCAGCGACAACTACAACAACTTTCCTCAAAGTTCAAAACCAGCCCACAAAGCCCAAACGTCGCAAGTGTCGTGAAACCACTATCTCCGCTTCTGCCTCTCCCAACGACACCCACTCCTCTTCCGCTTCCACCCCTCGCCGCACTCACGATAATAACAACAACAACAATACCCCTTTATGCGCGACCCGAACCCAGGAACCCGAACCCGACCTACCATTACCCGATTCACCCTCCACTTACAGGATTCGGTACTCTCCTGGCAGGTTTTCCCCAGTCATGGACTTCACCAACTCTTCGCCCATCTCCAACGGGCATTCGGGTCAGGACCCGTTTCCTTCTAGCTTCTCCAAATTTAATTCAGCTCTCACCGCGGGGCTCCTCAACCCAATGTCGCCCCCGCCCGATAAGCCCCGATCGAGCCCTACCCTCTTTGAAATGATGGTTAGTGAACCAGATATCCATCAGAGAACTACCCCTCAGATCCCACCCAACAACACCAACATTGCTCAATCGTCGGTGCAGAAACCCCAAGTTCTTGTTCAGGATCGGCAAACCCTCATGATGCAGCGGATATCGGAGTTGTTGGCTTCTCGGAGCCCCGGCAATCAGTTCAACGACTCGTCTTCTAGTGACATCAAGCTCACCCTCAGCTCCAAAGATGGATTCAGCATCTCCATGAACGTGCATCGCCAGATTCTCGTTGCGCACAGCAGGTTCTTCGCGGTGAAGCTTTCTGATCGGTGGACGCAGCAGCAGCAGCGGTCGGCGTCGCCTTACCTTGTGGAAATTGCTGACTGTGATGATGTTGAGGTCTATGTGGAGACATTGAGGTTGATGTATTGTAAGGATCTTAGGAAGAAACTAATGAAGGAGGATGTCTCAAGAGTTCTGGGTATCTTAAAGGTTTCAGCTGCAATTGGATTTGATGCTGGGGTTTTGTCTTGTTTGGAGTACTTGGAAGCGGCCCCATGGGCTGAGGATGAAGAAGAGAAGGTGGCCTCACTCCTTTCAGAGCTTCGTCTTGAAGCTGTTGGAGCTGGGGAGGTTTTGAAGAGGGTTTCAACTGAAGTTCCTAGTGGAAATGAAGAGGGGAATGATAATGAGGAAGTTCTTCTTAAACTTATTCGTGTGGTTCTTGAAGGCAAAGATGAGAAGGCCAGGCGCGAAATGAAAGGGTTGGTGTCCAAGATGCTCCGTGAAAATTCTTCTCAGAATGATCTTAGGAAGGAGTCATTGTACTCAGCATGTGATGATTGTCTGCAGTTACTTCACCACCATTTTTTGAGGGCTGCAGCCTCGGACCTGCAGGATGTAAGTCAAATTGCACGACAAGCGGATAATTTGCATTGGATTTTGGATATTTTAATTGATAGACAGATTGCTGAGGATTTCCTGAAAACATGGGCATCTCAATCAGAATTAGCTGAAGCACATTCTAAAGTGCCTGCAGTTCACAGGTTTGAGGTTAGCAGAGTTACAGCAAGGTTGTTTGTTGGAATTGGGAAGGGACAATTATTGGCCTCTAAAGATGCCAGGTGTTTACTTCTGAAAACATGGCTGGTGCCCTTTTATGATGATTTCGGTTGGATGAGGAGGGCGTCCAAAGGCCTTGATAGGCACCTAATTGAGGATGGTCTTAGCAACACAATTCTCACTCTACCACTCTCCTGGCAACAGGAAATTTTGCTTGCTTGGTTTAACCGTTTCTTGAATTCTGGTGAAGATTGCCCAAATATTCAAAGAGGGTTTGAAGTTTGGTGGAGAAGGGCTTTCTGGAAGAGGAATGGAGAGCAAGAACAGACAAGACAATTACGAATTACAAGTGCATCAATTGAGAACCCTTGA 1848 0.4794 MAATTTTTFLKVQNQPTKPKRRKCRETTISASASPNDTHSSSASTPRRTHDNNNNNNTPLCATRTQEPEPDLPLPDSPSTYRIRYSPGRFSPVMDFTNSSPISNGHSGQDPFPSSFSKFNSALTAGLLNPMSPPPDKPRSSPTLFEMMVSEPDIHQRTTPQIPPNNTNIAQSSVQKPQVLVQDRQTLMMQRISELLASRSPGNQFNDSSSSDIKLTLSSKDGFSISMNVHRQILVAHSRFFAVKLSDRWTQQQQRSASPYLVEIADCDDVEVYVETLRLMYCKDLRKKLMKEDVSRVLGILKVSAAIGFDAGVLSCLEYLEAAPWAEDEEEKVASLLSELRLEAVGAGEVLKRVSTEVPSGNEEGNDNEEVLLKLIRVVLEGKDEKARREMKGLVSKMLRENSSQNDLRKESLYSACDDCLQLLHHHFLRAAASDLQDVSQIARQADNLHWILDILIDRQIAEDFLKTWASQSELAEAHSKVPAVHRFEVSRVTARLFVGIGKGQLLASKDARCLLLKTWLVPFYDDFGWMRRASKGLDRHLIEDGLSNTILTLPLSWQQEILLAWFNRFLNSGEDCPNIQRGFEVWWRRAFWKRNGEQEQTRQLRITSASIENP. 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06517 615 MobiDBLite consensus disorder prediction 1 15 - -
Seca12g06517 615 Gene3D Potassium Channel Kv1.1; Chain A 182 323 IPR011333 -
Seca12g06517 615 ProSiteProfiles BTB domain profile. 211 289 IPR000210 GO:0005515
Seca12g06517 615 MobiDBLite consensus disorder prediction 1 81 - -
Seca12g06517 615 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 190 601 IPR038920 -
Seca12g06517 615 MobiDBLite consensus disorder prediction 28 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06517 Seca-Chr12 157175522 157178286 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06517 - - ccaj:109800730 978.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06517 12 157175522 157178286 Seca12g06517 12 157175522 157178286 ECH
Seca12g06517 12 157175522 157178286 Seca4g01961 4 32928783 32932109 PCT