Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01860 ATGTACTCGAGCAATTTAATTGGCTTCCTCTTGGCTGTGGTCTCCGGCGCTTTCATCGGCTCCAGCTTCATCATCAAGAAAAAGGGTCTCCAACGTGCAAGCCTCAACGGCTCTCGTGCCAGTGTTGGAGGCTATGGTTATCTGCTACAACCTCTTTGGTGGCTCGGAATGGTTACAAGTCACATTCCTTTTTTGGGGTTTCTAATTTTGAACCTCCTCTTTTCAATAGTGATTGTTGGAGAGATATCGAATTTCGTAGCATATATTTATGCCCCTGCGGTGCTTGTTACCCCACTTGGTGCGTTGAGTATTATTGTTAGTGCTGTTTTGGCACATTTCATGTTGAACGAGAAGCTGCAGAAAATGGGCATGCTTGGGTGTCTTCTATGCATCGTGGGATCCACTATGATCGTGCTCCATGCACCTCAAGAGAAGTCTCTTAGTTCTGTTTTAGAAATATGGCAATTGGCTGTTCAACCAGCATTCCTCTTGTACACAGCCTCAGCAATGGCTGTAGTATTGTTTTTGATTTTGTATTGTGCTCCCCGCTTTGGCCAAACCAATATTTTTGTATATACTGGAATATGCTCCATTATCGGATCATTGACTGTCATGAGTGTAAAAGCAATTGGCATTGGTATAAAACTTACCTTAGAGGGTGCAAACCAGTTTGTCTACTTTCAGACATGGATTTTCACTATGGTTGCTATTTCCTGCATTGTCACTCAATTAAATTACCTTAATATGGCATTGGATACTTTCAACACAGCAGTTGTTTCTCCCATCTATTATGCCTTATTCACATCTTTTACAATATTAGCTAGTGCAATCATGTTTAAGGACTATGCTGGTCAGAGTATAAGCAGTATTGCATCAGAGCTGTGTGGTTTCATCACTGTTTTATCAGGAACAACTATATTGCACTGTACAAGGGAGCCTGATCCTCCAGTCAATACAGATTTATACAGCTCCTTGTCTCCAAAAGTATCATGGTATGTCCAAGGCAATGGCGAACCTTGGAAACAGAAAGAGGAAGATGGACCACCCTTTAATTTAATTACAGTTATCCGGCAAGACCATTTCAAGTGA 1089 0.416 MYSSNLIGFLLAVVSGAFIGSSFIIKKKGLQRASLNGSRASVGGYGYLLQPLWWLGMVTSHIPFLGFLILNLLFSIVIVGEISNFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCIVGSTMIVLHAPQEKSLSSVLEIWQLAVQPAFLLYTASAMAVVLFLILYCAPRFGQTNIFVYTGICSIIGSLTVMSVKAIGIGIKLTLEGANQFVYFQTWIFTMVAISCIVTQLNYLNMALDTFNTAVVSPIYYALFTSFTILASAIMFKDYAGQSISSIASELCGFITVLSGTTILHCTREPDPPVNTDLYSSLSPKVSWYVQGNGEPWKQKEEDGPPFNLITVIRQDHFK. 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01860 362 PANTHER UNCHARACTERIZED 4 314 IPR008521 GO:0015095|GO:0015693|GO:0016020
Seca4g01860 362 Pfam Magnesium transporter NIPA 5 312 IPR008521 GO:0015095|GO:0015693|GO:0016020
Seca4g01860 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01860 Seca-Chr4 31159093 31163478 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01860 K22733 - gmx:100783541 626.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06339 12 155323378 155329425 Seca4g01860 4 31159093 31163478 ECH
Seca4g01860 4 31159093 31163478 Seca4g01860 4 31159093 31163478 ECH
Seca12g06339 12 155323378 155329425 Seca4g01860 4 31159093 31163478 PCT