Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01854 ATGCAAGAGACGCTGCTCACTGTGTCGGAGCAACCGCAACATCAACTTCTTCAACACGCTAATGCAAAGAAGAAGAAATCCGAAGAAGGAGAAGAAGAGAAAGATAAGGAGATGGATCTAGTAGTGATACCAGCAGCGCCGCCGCCGTGCCGGCGTCCTCCACGAACGCGGCGCGTGTCACCGGCGGCGGTGGAGAAGGAACTTCCAAACGGCGACGTTTACAGCGGAAGCTTATCGGGGAACGTGCCGCACGGGACAGGGAAATACGTTTGGTCTGATGGATGCATGTACGAAGGAGAGTGGAATAAAGGGAAGGCATGGGGGAAAGGAAGGTTTTCGTGGCCTTCAGGCGCTACCTATGAGGGTGAGTTCGTTTGTGGCCGAATGGAAGGTTACGGAACCTTCGTCGGTGTTGATGGTGACACGTATCGTGGTTCTTGGGTTTCAGACCGGAAGCATGGGTTTGGAGAGAAGTGTTATGCTAATGGTGATGTGTATGAAGGTTGGTGGAGGTGCAACTTGCAGGAAGGTGAGGGAAGGTATGTGTGGAAGAACGGGAATGAGTATATTGGTGAGTGGAAGTGTGGGGCCATATCGGGGAACGGTGTGTTGATGTGGAAGAATGGGAACCGTTATGAAGGGTGTTGGGAGAACGGTGTTCCAAAGGGGAAAGGGTTTTTCACTTGGCGAGATGGAAGCACCTCTGCTGGGAATTGGGGGGATGAGGAGAGGAATGGGATGATGAAGAAGAGGGTGTCTGTGGATGGTTCAAAGAGTGTGAGCTTTCCAAGGATTTGCATTTGGGAACTTGATGGGGAAGCTGGGGATATTACTTGTGACATCGTTGATAATGTGGAGGCTTCTATGTTTTATAGAGATGGAACTAGTGAATCGGAGAATGGTGGAGATGGTGTTGGTGGTTTGCAGAGGAGTCCCTGTTGTTCTCTTGATGGGGATGTTAAGAAACCTGGTCATACTGTTTCTAAAGGGCATAAGAACTACGATTTGATGCTTAATCTTCAACTGGGTATTAGGTACTCTGTTGGGAAACATGCTTCTGTGCTGCGAGAGCTTAGGCCTGGAGATTTTGATCCAAAGGAGAAGTTCTGGACGAGGTTCCCTCCAGAAGGGTCAAAGTTCACACCTCCACATCAGTCGGTGGACTTTAGGTGGAAAGACTACTGTCCCGTGGTTTTCAGACATCTAAGGGAATTATTTGCCATAGATCCTGCGGATTACATGCTTGCTATTTGTGGCAATGACACACTTAGAGAAATGTCTTCTCCTGGCAAAAGTGGAAGCTTCTTTTACCTCACTCAAGATGACCGATTTATTATCAAGACCTTGAAGAAGTCTGAAGTCAAGGTGCTCATTAGGATGCTTCCAAGTTACTATCAACATGTTTGTCAGTACAAGAACTCCCTAGTAACAAAATTCCTGGGCGTTCATTGTGTCAAACCTATTGGAGGTCAGAAGATACGGTTTATTGTAATGGGCAATGTATTTTGTTCGGAGTATCGGATTCATAAGCGGTTTGACCTCAAAGGTTCTTCTCATGGTCGTATAACCAATAAACCCCAGGAGGAGATTGATGAGACTACCACTCTTAAAGACCTTGATCTTAGTTTTGTCTTTCGACTAGAACAGTCTTGGTTTCAAGAGCTTAAATGGCAACTTGACAGAGACTGTGAATTCCTGGAAGCAGAGGGAATAATGGATTACAGTTTTCTGATTGGCCTTCATTTTCGTAATGATAACTCTGTTGATGAAATAAAAAGTTCACAGAATGAGTTGTGTTCAGGCAAGAGGGACATGCAAAATGATGATATTCAGGATATGAGGTGGATACCCATAGGCCGGGGACCTCTAATAAGGCTGGGAATAAACATGCCTGCCAGAGCCGAGAGTGTGTGTAAAGCTGGATTGGATCAGCACACAGGTACTGGAAGTAGCAATTCTACCCTTTCAGAGAGTAGTGGTGAGATCTCTGATGTAATCCTCTATTTTGGTATCATTGACATTCTCCAAGATTATGATATTAGCAAAAAGCTAGAGCATGCATACAAGTCACTGCAAGTGGATCCCACTTCCATCTCAGCCGTTGATCCCAAGCTATACTCCAAAAGGTTTAGGGATTTCATACACAGAATCTTTGTGGAGGACAAATGA 2169 0.4597 MQETLLTVSEQPQHQLLQHANAKKKKSEEGEEEKDKEMDLVVIPAAPPPCRRPPRTRRVSPAAVEKELPNGDVYSGSLSGNVPHGTGKYVWSDGCMYEGEWNKGKAWGKGRFSWPSGATYEGEFVCGRMEGYGTFVGVDGDTYRGSWVSDRKHGFGEKCYANGDVYEGWWRCNLQEGEGRYVWKNGNEYIGEWKCGAISGNGVLMWKNGNRYEGCWENGVPKGKGFFTWRDGSTSAGNWGDEERNGMMKKRVSVDGSKSVSFPRICIWELDGEAGDITCDIVDNVEASMFYRDGTSESENGGDGVGGLQRSPCCSLDGDVKKPGHTVSKGHKNYDLMLNLQLGIRYSVGKHASVLRELRPGDFDPKEKFWTRFPPEGSKFTPPHQSVDFRWKDYCPVVFRHLRELFAIDPADYMLAICGNDTLREMSSPGKSGSFFYLTQDDRFIIKTLKKSEVKVLIRMLPSYYQHVCQYKNSLVTKFLGVHCVKPIGGQKIRFIVMGNVFCSEYRIHKRFDLKGSSHGRITNKPQEEIDETTTLKDLDLSFVFRLEQSWFQELKWQLDRDCEFLEAEGIMDYSFLIGLHFRNDNSVDEIKSSQNELCSGKRDMQNDDIQDMRWIPIGRGPLIRLGINMPARAESVCKAGLDQHTGTGSSNSTLSESSGEISDVILYFGIIDILQDYDISKKLEHAYKSLQVDPTSISAVDPKLYSKRFRDFIHRIFVEDK. 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01854 722 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 418 717 IPR002498 GO:0016307|GO:0046488
Seca4g01854 722 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 319 500 IPR027484 -
Seca4g01854 722 Pfam MORN repeat 189 211 IPR003409 -
Seca4g01854 722 Pfam MORN repeat 166 187 IPR003409 -
Seca4g01854 722 Pfam MORN repeat 97 118 IPR003409 -
Seca4g01854 722 Pfam MORN repeat 120 142 IPR003409 -
Seca4g01854 722 Pfam MORN repeat 212 234 IPR003409 -
Seca4g01854 722 Pfam MORN repeat 143 165 IPR003409 -
Seca4g01854 722 Pfam MORN repeat 74 96 IPR003409 -
Seca4g01854 722 MobiDBLite consensus disorder prediction 21 40 - -
Seca4g01854 722 FunFam Phosphatidylinositol 4-phosphate 5-kinase 104 148 - -
Seca4g01854 722 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 69 187 - -
Seca4g01854 722 Gene3D - 64 103 - -
Seca4g01854 722 Gene3D - 104 152 - -
Seca4g01854 722 Gene3D - 191 262 - -
Seca4g01854 722 MobiDBLite consensus disorder prediction 1 64 - -
Seca4g01854 722 Gene3D - 501 718 - -
Seca4g01854 722 SUPERFAMILY SAICAR synthase-like 329 718 - -
Seca4g01854 722 SMART PIPK_2 359 719 IPR002498 GO:0016307|GO:0046488
Seca4g01854 722 FunFam Phosphatidylinositol 4-phosphate 5-kinase 319 500 - -
Seca4g01854 722 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 330 718 IPR002498 GO:0016307|GO:0046488
Seca4g01854 722 SMART morn 141 162 IPR003409 -
Seca4g01854 722 SMART morn 118 139 IPR003409 -
Seca4g01854 722 SMART morn 164 185 IPR003409 -
Seca4g01854 722 SMART morn 210 231 IPR003409 -
Seca4g01854 722 SMART morn 72 93 IPR003409 -
Seca4g01854 722 SMART morn 95 116 IPR003409 -
Seca4g01854 722 SMART morn 187 208 IPR003409 -
Seca4g01854 722 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 82 719 IPR023610 -
Seca4g01854 722 PIRSF PIP5K_plant 241 722 IPR017163 GO:0005524|GO:0016308
Seca4g01854 722 PIRSF PIP5K_plant 8 249 IPR017163 GO:0005524|GO:0016308
Seca4g01854 722 MobiDBLite consensus disorder prediction 1 18 - -
Seca4g01854 722 CDD PIPKc_AtPIP5K_like 333 717 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01854 Seca-Chr4 31091927 31095891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g01854 32 721 Acyl Lipid Metabolism Gene Families AT1G21980 65.978 0.0 966
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01854 K00889 - gmx:100808235 1212.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01854 4 31091927 31095891 Seca4g01854 4 31091927 31095891 ECH
Seca12g06350 12 155465459 155469912 Seca4g01854 4 31091927 31095891 PCT