Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06350 ATGCAAGAGACCCTCCTCACTCTCTCCCTCTCCCACCAAGACATTCACATTTACCCCAACAACCCTCAAACACCCACCGCAGCAAAGAAGAAAAAATCCCAACAACAACACAAGCTAGGAACCGACCACCTCGTTGTCCCGTCTCCGTGTCTGCCGCGGCCGCTAAGGACACGACCTCAACCCGATTCCCGCCGCGTCAGTCCCGCCGTTTCTCCTCCCTCCGCCGTCGCCGGCGACGGAGAGAACCTCACCTCCGCGGCGGAGAAGGCCCTCCCCAACGGCGACATCTACACCGGGACCCTTTCGGGAAACGCGCCCCACGGCACCGGAAAATACCTCTGGTCGGACGGGTGCATGTACGAAGGTGAGTGGAGGAAAGGGAAGTCGAGTGGGAAGGGAAGGTTCTCGTGGCCCTCTGGAGCCACCTACGAAGGCGAGTTCAAGTCGGGTCGGATGGAAGGGTTCGGGTCATTCATCGGCGTCGACGGCGACATGTACCGAGGGTCGTGGCTCGCCGATCGGAAGCACGGGTTCGGCGAGAAACGTTACGCTAATGGAGACGTGTATGAGGGATGGTGGAGGTGCAACTTGCAGGACGGTGAAGGAAGGTACGTGTGGAAGAATGGGAATGAGTACGTTGGGGAGTGGAAGAATGGTGCTATTTCGGGTAAAGGTGTTTTGGTTTGGCCAAATGGGAACCGTTATGAAGGGTATTGGGAGAATGGGGTGCCTAAAGGGAAGGGAGTGTTCACTTGGTATTCTGGGATTTTAGGGAAAGAGGAGAAGAATTGTGAGTATCAAATGATGGAAGCAAGGAAGAGGTCTTCTGTGGATGGTTCTAAGAGTGTGAGTTTTCCAAGGATTTGCATTTGGGAACTGGATGGTGAAGCTGGGGATATTACATGTGACATTGTTGACAATGTGGAGGCTTCTATGTTTTACAAGGATGGTAGTGAATCAGAAAACAGTGGAGAAGGTTATGGGGTGTTGCACAAAAGTCCCTGTTGGTCTGTTGATGGTGAGGTCAAGAAGCCTGGTCAAACTGTGTCAAAGGGACATAAGAGCTACGATCTCATGCTTAGTCTCCAACTGGGTATCAGGTACACTGTTGGTAAGTATGCTTCAATTGTGCGAGAGCTTAGGCCAGGGGATTTTGATCCCAAGGAGAAATTCTGGACAAGATTGCCAATGGAAGGGTCTAAGTTAACACCGCATCAATCAATGGACTTCAGGTGGAAAGACTACTGTCCCATGGTGTTCAGACATCTAAGGGAATTATTTGCGATAGATCCTGCGGATTACATGTATGCTATTTGTGGAAATGATACACTCAGAGAGATGTCATCTCCTGGCAAAAGTGGAAGCATCTTTTATCTCACTCAAGATGACCGCTTCATAATCAAGACGGTGAAGAAGTCTGAAGTCAAGGTACTTATCAGGATGCTTCCAAGTTACTACCAACATGTTTGTCAATACAAGAACTCCTTGGTAACAGCATTCCTGGGTGTTCACTGTGTCAAGCCTGTTGGAGGTCAAAAGACCCGGTTCATTGTGATGGGGAATGTGTTTTGTTCTGAGTATAGGATCCATAAGAGGTTTGACCTCAAAGGTTCTTCTCATGGTCGAATCACGGATAAACCTCGGGAGCAGATTGATGAGACTACTACTCTCAAAGACCTTGATCTTAATTTTGTCTTTCGCCTGGAACAGTCTTGGTTTCAGGAGCTTAAATGGCAACTTGATAGAGACTGTGAGTTCCTGGAGTCAGAGGGAATCATGGATTATAGTCTTCTGATTGGCCTTCATTTTCGCAATGATTACTCAGTTGATGAATTGAAAAGTTCACCACGTGATTTGCATTCTGGTAAGAGAGACATGGATGATGATGAGATGCACTTATGCCGGTATGCTCTTTTCTCTCTTTATTTACATTTGAGCATCCTTGTTGTTACTAGTTTATATTTAACCGTTTTAAGATTATTCTCAGACTCCTTATGTTTTTATTCATCACCCAATAGACTTAGGAGATTTCGAAATCTTGATGTGCTTGCTTCTATTAGTTTCTGGATTAAACTGTTAATGTGA 2085 0.4734 MQETLLTLSLSHQDIHIYPNNPQTPTAAKKKKSQQQHKLGTDHLVVPSPCLPRPLRTRPQPDSRRVSPAVSPPSAVAGDGENLTSAAEKALPNGDIYTGTLSGNAPHGTGKYLWSDGCMYEGEWRKGKSSGKGRFSWPSGATYEGEFKSGRMEGFGSFIGVDGDMYRGSWLADRKHGFGEKRYANGDVYEGWWRCNLQDGEGRYVWKNGNEYVGEWKNGAISGKGVLVWPNGNRYEGYWENGVPKGKGVFTWYSGILGKEEKNCEYQMMEARKRSSVDGSKSVSFPRICIWELDGEAGDITCDIVDNVEASMFYKDGSESENSGEGYGVLHKSPCWSVDGEVKKPGQTVSKGHKSYDLMLSLQLGIRYTVGKYASIVRELRPGDFDPKEKFWTRLPMEGSKLTPHQSMDFRWKDYCPMVFRHLRELFAIDPADYMYAICGNDTLREMSSPGKSGSIFYLTQDDRFIIKTVKKSEVKVLIRMLPSYYQHVCQYKNSLVTAFLGVHCVKPVGGQKTRFIVMGNVFCSEYRIHKRFDLKGSSHGRITDKPREQIDETTTLKDLDLNFVFRLEQSWFQELKWQLDRDCEFLESEGIMDYSLLIGLHFRNDYSVDELKSSPRDLHSGKRDMDDDEMHLCRYALFSLYLHLSILVVTSLYLTVLRLFSDSLCFYSSPNRLRRFRNLDVLASISFWIKLLM. 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06350 694 MobiDBLite consensus disorder prediction 16 81 - -
Seca12g06350 694 SUPERFAMILY SAICAR synthase-like 351 619 - -
Seca12g06350 694 Gene3D - 219 282 - -
Seca12g06350 694 Gene3D - 87 126 - -
Seca12g06350 694 Gene3D - 127 171 - -
Seca12g06350 694 Gene3D - 172 218 - -
Seca12g06350 694 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 439 625 IPR002498 GO:0016307|GO:0046488
Seca12g06350 694 SMART PIPK_2 381 662 IPR002498 GO:0016307|GO:0046488
Seca12g06350 694 SMART morn 164 185 IPR003409 -
Seca12g06350 694 SMART morn 187 208 IPR003409 -
Seca12g06350 694 SMART morn 141 162 IPR003409 -
Seca12g06350 694 SMART morn 95 116 IPR003409 -
Seca12g06350 694 SMART morn 118 139 IPR003409 -
Seca12g06350 694 SMART morn 210 231 IPR003409 -
Seca12g06350 694 SMART morn 233 254 IPR003409 -
Seca12g06350 694 CDD PIPKc_AtPIP5K_like 355 604 - -
Seca12g06350 694 FunFam Phosphatidylinositol 4-phosphate 5-kinase 127 171 - -
Seca12g06350 694 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 92 210 - -
Seca12g06350 694 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 352 694 IPR002498 GO:0016307|GO:0046488
Seca12g06350 694 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 341 521 IPR027484 -
Seca12g06350 694 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 106 625 IPR023610 -
Seca12g06350 694 MobiDBLite consensus disorder prediction 16 30 - -
Seca12g06350 694 Gene3D - 522 638 - -
Seca12g06350 694 Pfam MORN repeat 166 188 IPR003409 -
Seca12g06350 694 Pfam MORN repeat 143 165 IPR003409 -
Seca12g06350 694 Pfam MORN repeat 120 141 IPR003409 -
Seca12g06350 694 Pfam MORN repeat 235 255 IPR003409 -
Seca12g06350 694 Pfam MORN repeat 97 119 IPR003409 -
Seca12g06350 694 Pfam MORN repeat 189 210 IPR003409 -
Seca12g06350 694 Pfam MORN repeat 212 234 IPR003409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06350 Seca-Chr12 155465459 155469912 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g06350 42 636 Acyl Lipid Metabolism Gene Families AT1G21980 66.883 0.0 830
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06350 K00889 - gmx:100789188 1005.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06350 12 155465459 155469912 Seca4g01854 4 31091927 31095891 PCT