Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01810 ATGCCACGCTTTCCACGTAGGCTTCAGACACAAACCAATTACACAATTAACAGAGTCACTCGTTGTTTCCACAACCATCTTCTTATCTTCTTGTCCCTCCTTAACCCACTATCCCTCAACTGTGATACAGAGGAAAAGCAAAGGGAAATGGCCCTGCACTTGCAGGCACCCACCACAACCACCCTTCAAACTGCAAGGTTATTAGCCCCCACTGGCAACAATGTTGGCTTGCGACCACAGTTCAATCCTTTTGGTTTGAAGTCATCTTTCTTCTCTGGTTCCCTTAACCTCTTATTTCAACCTAATCAACACCATCTTACTTATGGAGCTCCTAGGATTTCCATGCGTGTGGCTTCCAAACAATCCTATATCTGTCGTGACTGCGGGTATATTTACAATGATAGGACCCCCTTTGAGAAATTGCCTGATAAATACTTCTGCCCTGTTTGTGGTGCTCCAAAACGAAGGTTTAGGCCCTATGCTCCAGCAGTCACAAAAAATGCAAATGATACAGATGTTAGAAAGGCACGAAAAGCAGAAATCAAAAGAGAAGAAACAATTGGGAAGGCACTTCCTATTGCAGTTGCCGTGGGAGTTGCAGTGCTTGCGGGATTATACTTTTATCTGAACAACAAATTCTAA 642 0.4377 MPRFPRRLQTQTNYTINRVTRCFHNHLLIFLSLLNPLSLNCDTEEKQREMALHLQAPTTTTLQTARLLAPTGNNVGLRPQFNPFGLKSSFFSGSLNLLFQPNQHHLTYGAPRISMRVASKQSYICRDCGYIYNDRTPFEKLPDKYFCPVCGAPKRRFRPYAPAVTKNANDTDVRKARKAEIKREETIGKALPIAVAVGVAVLAGLYFYLNNKF. 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01810 213 Gene3D - 121 160 - -
Seca4g01810 213 SUPERFAMILY Rubredoxin-like 120 164 - -
Seca4g01810 213 CDD rubredoxin 123 160 IPR024935 GO:0005506
Seca4g01810 213 ProSiteProfiles Rubredoxin-like domain profile. 120 160 IPR024934 GO:0005506
Seca4g01810 213 Pfam Rubredoxin 123 157 IPR024935 GO:0005506
Seca4g01810 213 PANTHER RUBREDOXIN-LIKE SUPERFAMILY PROTEIN 50 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01810 Seca-Chr4 29969820 29971839 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01810 - - gmx:100500575 241.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01810 4 29969820 29971839 Seca4g01810 4 29969820 29971839 ECH
Seca12g06307 12 154977787 154978212 Seca4g01810 4 29969820 29971839 PCT
Seca12g06377 12 155744458 155747151 Seca4g01810 4 29969820 29971839 PCT