Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01797 ATGATTGACCCATATTTCAACAGGACTCATGAGAAGCAGCTTCGATTATTTGATATTAGATTGAGGCAGACAGAACTTCATTCTTTTGGATGGAAGCAAGAAAGCAGTGAATCTCAATCAGCCCTGATTAATCAGGCTTGGTCTCCTGATGGGCTTTATATAACATCGGGTTCAGCGGATCCTGTGATTCACATCTTTGATATAAGATATAATGCTCACAGGCCTTCCCAATCCATAAGAGCTCATCACAAACGAGTTTTCAGAGCCATGTGGCTTCAGTCTGTTCCTCTTGTCATTTCCATATCATCTGATCTCAACATTGGATTGCACAAAGTTTACTAG 342 0.4064 MIDPYFNRTHEKQLRLFDIRLRQTELHSFGWKQESSESQSALINQAWSPDGLYITSGSADPVIHIFDIRYNAHRPSQSIRAHHKRVFRAMWLQSVPLVISISSDLNIGLHKVY. 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01797 113 Gene3D - 7 112 IPR015943 GO:0005515
Seca4g01797 113 PANTHER TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN 8 112 - -
Seca4g01797 113 SUPERFAMILY WD40 repeat-like 11 107 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01797 Seca-Chr4 29638925 29639937 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01797 - - gmx:100799587 202.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01797 4 29638925 29639937 Seca4g01797 4 29638925 29639937 ECH
Seca12g06384 12 155834468 155838769 Seca4g01797 4 29638925 29639937 PCT