Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01520 ATGCAAAGATCTGGGAGCGGTTGGTTTGAGACGTTTCTGAACAGTCACATTAACATAAGCTCCAATGGAGAAATATTTTCGGTTGGCAACAGAAGGGAAAACGTCTCTTCTATTTTGAATATAATGGATAAAGTGTATAATTTTGATTGGTTCATTAGTGCTTCCAAGAATGAGTGCTCTGCTGCTGTTGGCTTCAAGTGGATGCTTAATCAGGGTTTGATGGAGAATCATGAGGAGATAGTGGAATATTTCGAACGGAGACGAGTTTCTGCAATATTCCTGTTCAGAAGGAATTTGCTGCGAAGAATGATATCTGTGCTAGCTAATTCCTATGACAAGGATGCCAAGCCACTGAATGGAACCCACAAGTCTCACGTGCATTCTACCGTGGAGGCTAAAATTCTTGCTAGGTACAGGCCACGGATCAATATCACATTACTGATACCAGAGCTAAAGCAAACAGAGGAGACAGCTGCAAAAGCCATTGCATACTTTAAGAACACTCGTCATATTGTTCTCTACTACGAGGATCTTGTCAATAACCGCACTAAACTGAAGGATGTTCAAGAATTTTTAAGGGTGCCATACAGAGACCTGGAGAGCCGACAAGTGAAGATACATACTGGTTCATTATCGAAGCAAATTCAAAACTGGGATGAAGTCCAGAAAGCGTTGACAGGGACGCCATACCAGAGTTTTCTCTACAATGATCATTAA 717 0.4142 MQRSGSGWFETFLNSHINISSNGEIFSVGNRRENVSSILNIMDKVYNFDWFISASKNECSAAVGFKWMLNQGLMENHEEIVEYFERRRVSAIFLFRRNLLRRMISVLANSYDKDAKPLNGTHKSHVHSTVEAKILARYRPRINITLLIPELKQTEETAAKAIAYFKNTRHIVLYYEDLVNNRTKLKDVQEFLRVPYRDLESRQVKIHTGSLSKQIQNWDEVQKALTGTPYQSFLYNDH. 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01520 238 Gene3D - 1 225 IPR027417 -
Seca4g01520 238 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 208 IPR027417 -
Seca4g01520 238 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 1 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01520 Seca-Chr4 24611431 24614356 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01520 - - gmx:100808615 432.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01520 4 24611431 24614356 Seca12g02478 12 37693912 37697434 ECH
Seca4g01520 4 24611431 24614356 Seca4g01520 4 24611431 24614356 ECH