Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02478 ATGTCGGTGCTGGTGTTTTCAATGGTGTGTGGTGTTATTATCTGTTCTGTGTGTCTAAAACAGTCAAGCATCCACGCAAGAACTATACTTTTGGAGTTGCAAGAGATTGAGAAGCCTTCTCAGAGTATATTGAACTTAACAGATATTCCTTACCTACATTACCCCAAACCTTTGTCTTTTAACAGGAGTGAGTGTGGTCGTAATCCTGTGCAATTCTTTGCCATATTGACAAATCAGAGATCAGGAAGTGGGTGGTTTGAGACCCTTTTGAATAGCCATATTAATGTAAGCTCTAATGGGGAGATATTTTCAGTTAGAGAAAGACGAGTAAATGTTTCTACAATTGTACAGACTTTAGATAAAGTTTACAATTTGGACTGGCTCAGTAGTGCTTCCAAGAATGAGTGTTCTGCTGCAGTTGGCTTAAAGTGGATGCTTAATCAGGGACTAATGGAGCACCCTAAGGAAATAGTAGACTACTTCAACCGGAGAAGTGTTTCTGTCATATTTCTTTTCCGGAGAAACTTATTACGTAGGTTTGTATCCATGCTTGCGAATTCCTATGACCGTTATGCAAAGCTATTGAATGGAACTCACAAGTCTCATGTTCATTCTGCAGAAGAGGCTGATACTCTTTCAAAGTACAAGCCTACCATAAATTCTACATCATTGCTAATGGACTTAAAGGATATGGAGATGAGAGCTGCAAAGGCTTTAGAATACTTCAACACCACACGACATATGATCTTGTACTATGAGGATCTTATAAGAAATCGTACTAAGCTAAAAGATGTGCAAGAGTTTTTAGGATTGCCACAGATGGAATTAACAAGCCGCCAGATTAAGATACATAGAGGACATTTGTCAGACCACATTAGAAACTGGGATGATGTTACTAAAACACTCAAAGGAACTGCTTATGAGAGTTTTCTCCAAGCTGACTATTCGTCGTAA 954 0.3878 MSVLVFSMVCGVIICSVCLKQSSIHARTILLELQEIEKPSQSILNLTDIPYLHYPKPLSFNRSECGRNPVQFFAILTNQRSGSGWFETLLNSHINVSSNGEIFSVRERRVNVSTIVQTLDKVYNLDWLSSASKNECSAAVGLKWMLNQGLMEHPKEIVDYFNRRSVSVIFLFRRNLLRRFVSMLANSYDRYAKLLNGTHKSHVHSAEEADTLSKYKPTINSTSLLMDLKDMEMRAAKALEYFNTTRHMILYYEDLIRNRTKLKDVQEFLGLPQMELTSRQIKIHRGHLSDHIRNWDDVTKTLKGTAYESFLQADYSS. 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02478 317 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 1 315 - -
Seca12g02478 317 Gene3D - 71 300 IPR027417 -
Seca12g02478 317 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 71 313 IPR027417 -
Seca12g02478 317 Pfam Sulfotransferase domain 75 275 IPR000863 GO:0008146
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02478 Seca-Chr12 37693912 37697434 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02478 - - gmx:100795357 546.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g02478 12 37693912 37697434 Seca12g02478 12 37693912 37697434 ECH
Seca4g01520 4 24611431 24614356 Seca12g02478 12 37693912 37697434 ECH
Seca12g02478 12 37693912 37697434 Seca12g02478 12 37693912 37697434 PCT