Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00681 ATGAACAGGACTCAGTTGCAACAACAGGCTGCCTTCATGCGAAGCTCACTCCTTGATGAGGGGTACCTTGATGAGCAATTCATTCAGCTAGAGGAATTGCAAGACGATGTTAATCCCAATTTTGTGGAAGAAATTGCAACCTTATTCTTCAGCAACTCTATAAGACTGGTCTACAACATAGAACAAGAATTCATCGGAGCAAAGAAGGTGAAGAATGAATGTACCAGATTCAGTGAATATTGCGCAGCAGAAAACTTTGAGGGGTAA 267 0.4157 MNRTQLQQQAAFMRSSLLDEGYLDEQFIQLEELQDDVNPNFVEEIATLFFSNSIRLVYNIEQEFIGAKKVKNECTRFSEYCAAENFEG. 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00681 88 Gene3D HPT domain 1 64 IPR036641 GO:0000160
Seca4g00681 88 PANTHER PHOSPHORELAY INTERMEDIATE PROTEIN YPD1 7 63 IPR045871 GO:0000160|GO:0009927|GO:0043424
Seca4g00681 88 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 4 88 IPR036641 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00681 Seca-Chr4 11403318 11408540 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00681 K14490 - gmx:100780856 135.961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00681 4 11403318 11408540 Seca4g00681 4 11403318 11408540 ECH
Seca4g08714 4 207577839 207579484 Seca4g00681 4 11403318 11408540 ECH
Seca4g11856 4 259218897 259220681 Seca4g00681 4 11403318 11408540 ECH