Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00202 ATGGAGGGAACTGGAAGCGGTGGTAGTGCACCCGTTAATCAATACTGGCAAGAATTTTCGAAGCTGTTTCAATATTATTTGGATAAATCTACTCCCCACACCGTTTATAGATGGATTGGGACTTTGGTTATTGCATCCATCTATGCTCTTCGGGTTTTTTATGTGCAGGGATTTTACATTGTCTCTTACGGGCTCGGAATCTACCTCCTCAATCTCTTGATTGGTTTTCTCTCCCCTCGTGTTGATCCCGAGATCGAGCCTTCTCTCCCAACCAAAGGCTCCGATGAGTTCAAACCCTTCATTCGCAGACTCCCTGAGTTTAAGTTCTGGTATTCTTTCACCAAGGCATTCTGCATAGCTTTTGTGATGACCTTCTTTTCTGTATTTGATGTTCCTGTCTTTTGGCCTATATTACTCTGTTACTGGATTGTTCTGTTTGTCCTTACAATGAGGCGCCAGATTGCTCACATGATCAAATACAAATATGTCCCATTTGATCTTGGAAAACAGGTTCAGTTTCACTTGCTTTTTGCATCATTTACACTTGTGCACATCTTATCCTATTTAAGTATGGGGGTAAGAAATCTTCTGCAAGTAGCAGTGGCTCTCGAGCAGACTAAAGCTTGGCTGTGTTATGATTTGAAGAACACAGATCTAATAGATGAAAAGCAAAGGTAG 678 0.4159 MEGTGSGGSAPVNQYWQEFSKLFQYYLDKSTPHTVYRWIGTLVIASIYALRVFYVQGFYIVSYGLGIYLLNLLIGFLSPRVDPEIEPSLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYVPFDLGKQVQFHLLFASFTLVHILSYLSMGVRNLLQVAVALEQTKAWLCYDLKNTDLIDEKQR. 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00202 225 PANTHER PROTEIN RER1 9 171 IPR004932 GO:0016020
Seca4g00202 225 Pfam Rer1 family 16 170 IPR004932 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00202 Seca-Chr4 3200369 3202419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g00202 2 170 Miscellaneous Gene Families AT4G39220 76.705 8.30e-96 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00202 - - gmx:100499996 305.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00202 4 3200369 3202419 Seca4g00202 4 3200369 3202419 ECH
Seca4g00202 4 3200369 3202419 Seca12g02381 12 34012681 34016145 ECH