Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05572 ATGAAAGCAAAACTGATAGTGGAAGTGACATCTCATGCATCCCCATTAACAATAGCCCTGGCAGCTGCTGCAAGACAAACTGGAGGCAAGCTGGTGTGTATTCTCCCAGAACCAGTCCTTGATGAGTCCAAAGAAGTTATTAAGAACTCAGGACTTAAAGATCAAGTAGAATTTAGAACTGAAGACCCAACTAAGCTATTGCCCTACTATGAAAATATTGATTTCTCCCTTGTTGATTGCAGAGATGAAAGCTATGCAAGGTTGCTCAACTTGCTAGATGTTAATCCTACAAGATCTGTAGTGGTGGCAAACAATTTGGTTGGTGATGCCAAAGGGTTGGGAGGCTGTTTGAGAAAAAAGGATGAGAAAGTAGCAGTAAGATCTATAAAGCATCCTATGGGGAAAGGTATGGAAGTTACTATGATTAGCAAGAATGATGAGACTGTTAAGAGACTTGGGATCAGAAACCATCATAGCAGAAAAAGGAACAAGAGCAAGTGGGTTGCCAAGTTTGATGAGGAGAGTGGTGAGGAACATATATTCAGGGTACCACTGGTTGACTTGGTCTGTATTCTAAATCTTGTCCTGAACTTGAAGATCATAGCATTAGCTGATGACAACGGAAGTAGTAGTGGTTTTCCATCAGAAAGTGGGTGCAAGAACACAAATTATCAAATTTTCCTCCCTCCACCATATCAGAATATATCCTCTGCGATATGCAAACCTGTTTGGCATACATATGAATTGAGGTACACCAAGAACGGTGATACCACAACTATCATATTATCTGCTCCCTACACTGTTGGATGGGTGGGAATTGGATTTTCTAGAGATGGAATGATGGTTGGTTCCAGTGCAATGGTGGGATGGATTAATAAACATGGTCATGCAAAGATCAAGCAGTTTTATCTAAGAGGTAGGAAGCCATCAGAAGTCATAGTAGACAAAGGTGAACTGCCTCTAAATAATGTGCCTCCTGCTGTGGCAACAAATGGGGCAGAAATTTATTTGGCATTTCAGCTGCAAACGACAATCCCATTTCGGAAGCAACCAATTTTACTGGCTTTTAGTACTAAACATCCACATGAGCACCATCTGTCAAAGCATGATGACAAAACAGCAATTGTATTTGATTTTTCTTCAGGTGCAAAATCATGTTCTACTGACCCGGCATCCAATGGATTGATTAAGATGAGGAAGAGCCATGGAATAGTGGGCATAATAGGGTGGGGCCTAATCCTACCTGTAGGGGCAATTATTGCTAGATACTTCAAACATAAGGATCCCCTATGGTTCTATCTACATTCAGTCATTCAATTCGTGGGATTTGCATTTGGGCTTATCACGGTCCTTCTTGGATTACAACTTTATTCCAAAATGCATGTCCACATACCAGCTCACAGAGGCATAGGCATCTTTGTCCTTGTCTTAAGTATACTTCAGATATTGGCTTTCTTCTTGAGGCCAAGCAAGGATTCCAAGATTCGCAAGATTTGGAATTTGTACCACAGTTGGTTTGGAAGAATGGCACTTTTCTTTGCAGCCTTGAACATAGTGTTGGGGATGCAAGCTGCGGGAGCAGGGAATGATTGGAAGACAGGCTATGGATTCCTTGTCAGTATTATAATTGTTGCAGTTATCGTTTTGGAAATATTGGCATATTTGAAGAGGTCAGAACGTTCTTCTCTTCCTCCGAGTTACCAAATGGACTCAGTTGGAGAAGTTAACTTTCCAAATAATCTTGCTAAAGGGTGA 1755 0.4114 MKAKLIVEVTSHASPLTIALAAAARQTGGKLVCILPEPVLDESKEVIKNSGLKDQVEFRTEDPTKLLPYYENIDFSLVDCRDESYARLLNLLDVNPTRSVVVANNLVGDAKGLGGCLRKKDEKVAVRSIKHPMGKGMEVTMISKNDETVKRLGIRNHHSRKRNKSKWVAKFDEESGEEHIFRVPLVDLVCILNLVLNLKIIALADDNGSSSGFPSESGCKNTNYQIFLPPPYQNISSAICKPVWHTYELRYTKNGDTTTIILSAPYTVGWVGIGFSRDGMMVGSSAMVGWINKHGHAKIKQFYLRGRKPSEVIVDKGELPLNNVPPAVATNGAEIYLAFQLQTTIPFRKQPILLAFSTKHPHEHHLSKHDDKTAIVFDFSSGAKSCSTDPASNGLIKMRKSHGIVGIIGWGLILPVGAIIARYFKHKDPLWFYLHSVIQFVGFAFGLITVLLGLQLYSKMHVHIPAHRGIGIFVLVLSILQILAFFLRPSKDSKIRKIWNLYHSWFGRMALFFAALNIVLGMQAAGAGNDWKTGYGFLVSIIIVAVIVLEILAYLKRSERSSLPPSYQMDSVGEVNFPNNLAKG. 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05572 584 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 209 555 - -
Seca2g05572 584 Gene3D Vaccinia Virus protein VP39 1 159 IPR029063 -
Seca2g05572 584 SMART DOMON_3 270 357 IPR005018 -
Seca2g05572 584 Gene3D - 373 561 - -
Seca2g05572 584 CDD Cyt_b561_FRRS1_like 378 537 - -
Seca2g05572 584 Pfam Protein of unknown function (DUF1442) 3 182 IPR009902 -
Seca2g05572 584 Pfam DOMON domain 247 309 - -
Seca2g05572 584 Pfam Eukaryotic cytochrome b561 420 523 IPR006593 -
Seca2g05572 584 SMART 561_7 401 522 IPR006593 -
Seca2g05572 584 CDD DOMON_DOH 246 315 IPR045266 -
Seca2g05572 584 ProSiteProfiles DOMON domain profile. 245 359 IPR005018 -
Seca2g05572 584 ProSiteProfiles Cytochrome b561 domain profile. 360 558 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05572 Seca-Chr2 142034277 142039174 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05572 - - ccaj:109797335 682.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g05572 2 142034277 142039174 Seca2g05572 2 142034277 142039174 ECH
Seca2g05572 2 142034277 142039174 Seca4g11449 4 253631669 253636637 PCT