Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g05103 ATGGCGGTCACTACTCACTCTCTAGAAAAGAAGCACTGGTGGCTTACCAACCGAAAGATTGTTGAGAAATACATGAAAGATGCTCGTGCCTTGATTGCGTCACAAGAACAGAGCGGGATCACTACGGCTCTGAATCTTCTAGACGCGGCTCTCACCATCTCTCCGCGGCTTGACCAAGCTCTTGAGCTGAAAGCCAGGGCATTGCTTTATCTCCGGCGGTTCAAGGACGTCGCCGATATGCTTCAGGACTACATTCCAAGCCTGAGAGTGGCTAACGAGGACTCAAACTCCGATAGCTCCTCCTCCCAGCAACTTTCGAGGGAAGGAGTGAAGCTTCTCTCCCGTTCCGATTCGCAGGTTAGGGATCAGAGTTTCAAGTGCTTCTCCGTCTCGGACCTCAAGAAGAAGGTCATGGCAAGTCTAAGTAAAAGTTGCGAAAAAGAAGGGCAATGGAGATACATGGTTCTGGGAGAGGCTTGTTGCCATCTAGGACTAATGGAAGATGCCATGGTTCTTTTACAAACTGGGAAACGCCTTGCCAGCGCAGCATTCCGGCGAGAGAGTGTGAGTTGGTCCAATGACAGTTACTCTCTTTCAAGCATTTCATTCGCCGGAGACACCACAAACGCACCACCCACCACTCCGCCGCGAACCCCTTTAACAGACTCAGAGACCGTCACTCAACTCCTCAGTCACATCAAGTTCCTCCTCCGCCGCCGCGCCGCCGCACTGGCTGCCCTCAACGCCGGAATCTATTCCGAGGCCATCCGTCACTTCTCCAAAATCATCGACGGCCGCCGCGCCGCCCCACAGGGCTTCCTCGCCCAATGCTACATGTACAGAGCCTCCGCGCACCGTTCTTTAGGTCGAATTGCAGAGTCCATCGCCGATTGTAACCGCACCCTGGCACTTGACCCTACTTGCATTCAAGCACTCGACACCAGAGCTTCGCTTTATGAATCCATTCGTTGCTTGCTGGATTCTATGCATGACCTTGAACACCTGAAGCTTCTCTACAACTCAATCTTGCGGGACCGCAAGCTTCCTGGCCCTGCTTGGAAACCCCACAACGTGCATTACAGAGAGATTCCAGGGAAACTCTGTGCCCTCACTACGAAGATTCAAGAACTGAAACGTAGGCTGGCTGCAGGGGAAACTGGTAATGTTGATTACTATGCTTTAATTGGTGTTCGACGTGGGTGTTCTCGATCAGAGTTGGACAGGGCTCACTTGTTGCTGACTCTGAGGCACAAGCCTGATAAAGCTACCAACTTTATTGAACGGTGTGAGCTTGCTGATGAACGTGATATTGAGTCTGTTAAGGAGAGAGCCAAGATGTCAGCATTGTTGTTGTATAGGTTGGTTCAGAAGGGTTACACTAATGTGATGGGTACAATTCTGGATGAGGAAGCTGCTGAGAAGCAGAGGAAGAAGGCTGCTGCAGCAGCTCAACAAGCAGCAGTGATTCAAGTGCAGAAAGCAACTGAACCAGAGATGATCAATAAGCCAGATAATAACGGTAACAATAACAACAAGTCTACTATGATATCTTCTGCTACTGTGAATCCACCAGTGTTCCAGGGTGTGTTTTGCCGTGATCTTTCAGTGGTTGGGGACTTGCTCTCTCAGGTTGGATTCAATCGACCAATTCCAGTGAAGTATGAAGCTTTGAGCTGCTAA 1680 0.503 MAVTTHSLEKKHWWLTNRKIVEKYMKDARALIASQEQSGITTALNLLDAALTISPRLDQALELKARALLYLRRFKDVADMLQDYIPSLRVANEDSNSDSSSSQQLSREGVKLLSRSDSQVRDQSFKCFSVSDLKKKVMASLSKSCEKEGQWRYMVLGEACCHLGLMEDAMVLLQTGKRLASAAFRRESVSWSNDSYSLSSISFAGDTTNAPPTTPPRTPLTDSETVTQLLSHIKFLLRRRAAALAALNAGIYSEAIRHFSKIIDGRRAAPQGFLAQCYMYRASAHRSLGRIAESIADCNRTLALDPTCIQALDTRASLYESIRCLLDSMHDLEHLKLLYNSILRDRKLPGPAWKPHNVHYREIPGKLCALTTKIQELKRRLAAGETGNVDYYALIGVRRGCSRSELDRAHLLLTLRHKPDKATNFIERCELADERDIESVKERAKMSALLLYRLVQKGYTNVMGTILDEEAAEKQRKKAAAAAQQAAVIQVQKATEPEMINKPDNNGNNNNKSTMISSATVNPPVFQGVFCRDLSVVGDLLSQVGFNRPIPVKYEALSC. 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g05103 559 Gene3D Tetratricopeptide repeat domain 204 347 IPR011990 GO:0005515
Seca2g05103 559 CDD DnaJ 390 424 IPR001623 -
Seca2g05103 559 SMART dnaj_3 389 471 IPR001623 -
Seca2g05103 559 SUPERFAMILY Chaperone J-domain 386 424 IPR036869 -
Seca2g05103 559 SMART tpr_5 275 308 IPR019734 GO:0005515
Seca2g05103 559 PANTHER OS01G0273500 PROTEIN 8 559 - -
Seca2g05103 559 SUPERFAMILY TPR-like 241 336 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g05103 Seca-Chr2 137492625 137495188 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g05103 - - gmx:100808420 832.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g05103 2 137492625 137495188 Seca2g05103 2 137492625 137495188 ECH
Seca8g06678 8 161402452 161405690 Seca2g05103 2 137492625 137495188 PCT