Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04968 ATGAACAAAAATGGCGTGTTACCTTGGATGAAGCTTCAATGGCGGGGCATAGCAAAGGTGCGTTTGAAATGGGTCAAGAACCGAAGCCTCGACCACATCATCGACAAGGACACCGATCTCAAAGCCGCTTCACTCCTCAAGGACGCCATAAAACGCTCCTCCACCGGTTTCCTCACCGCAAAATCCGTCGCCGATTGGCAAAAGCTTCTTGGCCTCACTGTCCCCGTTCTCCGCTTCATGCGCAGGTACCCTACTCTCTTCCACGAGTTCCCTCACCCTCGCTGGCCCTCATTGCCCTGTTTCCGTTTAACCGACACCGCACTCCTTTTGGACTCTCAAGAACACACAATCCACACTGATTACGAGAATGCCACCGTTGAAAGGCTCTGCAAATTGCTCATGATGATGAAGACTCGCACGGTTCCACTTCAGTCCCTTTACCCTCTCAGATGGGACCTCGGTTTTCCCGATTCCTTCGATAAAACCCTAATTCCCAAATACCCTAACCACTTTCAATTCGTTAAGGCTCCCAATGGTGTCCCCTCTCTACGGTTGAAGCAGTGGTGTGAGGAATTTGCGGTTTCGGCGTTGCAGAAGAGCAATGAGCGTGAGAGTGATGATGGGTACAGGGAGTTCAAGAGAGGAAAAGCAGCGTTAGTTTTTCCGATGAGGTTTCCGAGGGGTTATGGGGCGCAGAAAAAGGTTAGGGCTTGGATGGAGGAGTTTCAGAAATTGCCTTATATTTCGCCTTATGTGGATTCATCGAGGATTGATCCTAATAGTGATTTGATGGAGAAGCGTGTTGTTGGGGTTCTGCATGAGATTTTGAGTTTAACTATGCATAAGAAAACCAAGAGGAACTACTTGAGAAGCTTGAGGGAAGAGTTGAATCTTCCGCATAAGTTTACTAGGATTTTCACCAGATATCCTGGCATATTTTACTTGTCTTTGAAGTGTAAAACAACGACTGTTACTCTTAGAGAAGGGTACCAGAGTGGAAAAGTAGTAGACCCTCATCCTCTTGTTCGACATAGAGACAAGTTCTACCATGTGATGAAGACGGGGCTTCTTTATCGTGGTGATGGCTCAATCTCGAAACCTCAGGAAGATGCTTTACTGCTTGATTCTGTGGCAAATGATGAAATAAGGGATGATGACTCTGAAGAGGAAGAGGTTGAAACAAGTGATGAATTCTGCGAGGATGAAGTTTCAGAGACAGATGAAAGTAGTGAATGA 1236 0.4668 MNKNGVLPWMKLQWRGIAKVRLKWVKNRSLDHIIDKDTDLKAASLLKDAIKRSSTGFLTAKSVADWQKLLGLTVPVLRFMRRYPTLFHEFPHPRWPSLPCFRLTDTALLLDSQEHTIHTDYENATVERLCKLLMMMKTRTVPLQSLYPLRWDLGFPDSFDKTLIPKYPNHFQFVKAPNGVPSLRLKQWCEEFAVSALQKSNERESDDGYREFKRGKAALVFPMRFPRGYGAQKKVRAWMEEFQKLPYISPYVDSSRIDPNSDLMEKRVVGVLHEILSLTMHKKTKRNYLRSLREELNLPHKFTRIFTRYPGIFYLSLKCKTTTVTLREGYQSGKVVDPHPLVRHRDKFYHVMKTGLLYRGDGSISKPQEDALLLDSVANDEIRDDDSEEEEVETSDEFCEDEVSETDESSE. 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04968 411 MobiDBLite consensus disorder prediction 375 411 - -
Seca2g04968 411 MobiDBLite consensus disorder prediction 381 411 - -
Seca2g04968 411 Pfam Plant organelle RNA recognition domain 25 355 IPR021099 GO:0003723
Seca2g04968 411 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 17 390 IPR045040 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04968 Seca-Chr2 136310560 136313781 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04968 - - gmx:100808403 627.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04968 2 136310560 136313781 Seca2g04968 2 136310560 136313781 ECH
Seca2g04968 2 136310560 136313781 Seca8g05831 8 150961512 150962681 PCT