Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04955 ATGGAGCATCAACAATCGAGGGTTGATACGTTTGAGAAATTCACGTGGACGATTGAGAACTTCTCTAGCTTGAATGTCAAGAAGCTTTACTCTGAGACTTTCGTATTGGGTGGCTATCCATGGAGGATTCTTGTGTTTCCACATGGGAACAAAGTGCAATACTTGTCAATTTATTTGGATGCTGTGAACTCTACTAATTTGCCGGAGGGATGGAGCAGAGATGTGAGATTCAGGTTGGCTGTATTAAATCAGCTCGTTAGTGACAAGACAATCACAAAAGAGTCCGTACACAAGTTCAATACAAGGGAGCAAGACTGGGGCTTCATATCTTTCATTACTTTAGCTGAACTTCATAATCCTTACAGGGGGTTTCTTGTTAAGGATACTTGTGTCATTGTTGTAGAGGTTTCCGTTATTAAGTCAAAACATGAGAATCAAGTGAATCGAGCAGCTAGCTTAACTGCTTCCCTGATACCAGGAGGTCAAGCTGGACACATGGGAGTGGAAGTCCCAAAACTAGAAGGTCAAGGTCTAGATCTGGGAACTCTCTCAAAAGTTTCTGAGCTAGATTCTACTAAGCCTGCTGAACACACTGATGTGGTATTGTTCTCGACCTCAATTGGGGAGCTTATGGATTTCAGGGGTTTAGGGCAAATAGAAAAAGTTTTTGTTCCAGTAGTGAAGTTTGTTCTCAGCATCCATCACTTGTTGCGTGCCAGCTGA 723 0.4246 MEHQQSRVDTFEKFTWTIENFSSLNVKKLYSETFVLGGYPWRILVFPHGNKVQYLSIYLDAVNSTNLPEGWSRDVRFRLAVLNQLVSDKTITKESVHKFNTREQDWGFISFITLAELHNPYRGFLVKDTCVIVVEVSVIKSKHENQVNRAASLTASLIPGGQAGHMGVEVPKLEGQGLDLGTLSKVSELDSTKPAEHTDVVLFSTSIGELMDFRGLGQIEKVFVPVVKFVLSIHHLLRAS. 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04955 240 ProSiteProfiles MATH/TRAF domain profile. 11 136 IPR002083 GO:0005515
Seca2g04955 240 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 9 152 IPR008974 GO:0005515
Seca2g04955 240 CDD MATH 13 136 IPR002083 GO:0005515
Seca2g04955 240 FunFam Ubiquitin carboxyl-terminal hydrolase 13 9 145 - -
Seca2g04955 240 Pfam MATH domain 18 137 IPR002083 GO:0005515
Seca2g04955 240 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 11 192 - -
Seca2g04955 240 SUPERFAMILY TRAF domain-like 13 142 - -
Seca2g04955 240 SMART math_3 13 117 IPR002083 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04955 Seca-Chr2 136180526 136182781 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04955 K11838 - cam:101489930 234.572
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04955 2 136180526 136182781 Seca2g04955 2 136180526 136182781 ECH
Seca2g04955 2 136180526 136182781 Seca6g03367 6 100728056 100752961 ECH