Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04596 ATGGGTTCAGTAGAAAGGTCTAAGAAGAAAACCCATTTATGGAAGAAAGCCATGCTCCATTTTTCTCTATGTTTTGTGATGGGGTTCTTTACTGGTTTAGCTCCAACAGGTAAATCTTCTTTCTTTTCCAGCAAAGTTGCAGTCTCAAATGGAACAGAATTTGCTCCACAACCTGCTGAAATGTCACACAAGACAACAAATGCCAATAGAAGTTGGATAGCTCCAACACCAGTGACCATGCCCACAAGGCTTAGAGGACAAAAAACAACAACAAAATTGCATGCAAAATCACAGCCCCTTTTGAAGCCTAGAAGACTTCTAATCATTGTAACTCCAACAAGCACAAAACTTCCCTACCAAGCAGTTTTTTTTAGAAGGTTGGCAAATACTATAAAGCTGGTTCCTCAACCATTGCTTTGGATTGTTGTGGAAGCCAAAACAGATTCCACAGAACTGTCAGAGATACTAAGAAAGACTGGTATCATGTATAGGCATGTGGTTTTCAAGGAAAACTTCACTGACTTAGAAGCTGAGCTGAATCACCAGAGAAATCTTGCACTTAAGCACATTGAGCATCACAGGCTGAATGGGATTGTTCACTTTGCTGGACTTTCCAATGTTTATGATCTCCAATTCTTCCAACAGCTTAGAGATATTGAGGTGTTTGGAACATGGCCAACTGCATTCTTAGCTGCAAATAGAAAGAAAGTGATAATAGAAGGACCTGTATGTGATTCATCTCAAGTCATTGGTTGGCATATAAGGAATATGAACAATGAAACTGACTCAATCACTCATCCCATTCATATTTCAAGTTTTGCTTTCAATAGTTCCATCCTCTGGGACCCTGAGAGATGGGGTCGTACTTCCTCTGTTCAAGACACCTCTCAGAATACAATAAAGTTCGTGAAGCAAGTAGTTCTAGAAGATGAGGCTAAGTTAAAGGGAATTCCACCAGAGGACTGCTCCAAAATCATGCTATGGCGTTTCAATTTTCGTGCTCGTACAATTTCAAATCACTAA 1023 0.3988 MGSVERSKKKTHLWKKAMLHFSLCFVMGFFTGLAPTGKSSFFSSKVAVSNGTEFAPQPAEMSHKTTNANRSWIAPTPVTMPTRLRGQKTTTKLHAKSQPLLKPRRLLIIVTPTSTKLPYQAVFFRRLANTIKLVPQPLLWIVVEAKTDSTELSEILRKTGIMYRHVVFKENFTDLEAELNHQRNLALKHIEHHRLNGIVHFAGLSNVYDLQFFQQLRDIEVFGTWPTAFLAANRKKVIIEGPVCDSSQVIGWHIRNMNNETDSITHPIHISSFAFNSSILWDPERWGRTSSVQDTSQNTIKFVKQVVLEDEAKLKGIPPEDCSKIMLWRFNFRARTISNH. 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04596 340 Pfam Glycosyltransferase family 43 127 331 IPR005027 GO:0015018|GO:0016020
Seca2g04596 340 CDD GlcAT-I 105 334 IPR005027 GO:0015018|GO:0016020
Seca2g04596 340 FunFam Glycosyltransferases 105 340 - -
Seca2g04596 340 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 12 334 IPR005027 GO:0015018|GO:0016020
Seca2g04596 340 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 106 340 IPR029044 -
Seca2g04596 340 SUPERFAMILY Nucleotide-diphospho-sugar transferases 105 337 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04596 Seca-Chr2 132038916 132041404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04596 1 336 Glycosyltransferase AT2G37090 60.632 9.64e-153 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04596 K20869 - gmx:100785607 601.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04596 2 132038916 132041404 Seca2g04596 2 132038916 132041404 ECH
Seca8g05410 8 145073641 145075862 Seca2g04596 2 132038916 132041404 PCT