Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04525 ATGAGAACAGACTCGAAGAAATCTTCCAAGTCTTCGTGGCCGAAATTAGCCGTGAGAAAGTGGCTCAATATGAAGAGCAGTGCTGAGACGTTTCACTCAGAATATTGTGTCACAGGAACAGAGAGGAGAAAGAGCTGCTCAGATAAAGATAGTTACGTCGTCGTTTCAGGGTGGTTGAAGGATTCTACAAATGGAATGAAACGTTCAGTACTTGGGAAGAAATCGACTCCTGTCAGCGATGCTCTGGATTTTAGGATGTTTGTGGGGACGTGGAATGTTGGGGGGAAGTCACCAAATGAAGGGTTGGACTTGAGGAATTGGCTGACGTCTCCTTCGCCAGCTGACATCTATGTAATTGGGTTCCAAGAAATTGTACCGTTAAATGCAGGGAACGTGCTTGGGCCGGAGGACAGTGGCCCAGCAGTAAAATGGCTGACCCTTATTCGTGAAGCCTTGAACACCAACAACAAGTACCACGATCACAACGACACCATGACCAATAATAACACTAGTGAACACGACCGAGAAGGAAACCTGAAGCCTAGGCCCAGTTTCTCAGAATTTCTCTCTTCAGAAAATGGAGAACGCTTTTGCCTAGTAGCAAGCAAGCAAATGGTTGGTATCTTCTTGTCCGTTTGGGTACGAGCAGATCTTTGTAACCATGTTAGCAATTTAAAAGTGTCCTGCGTTGGCAGAGGCATCATGGGCTATCTTGGAAATAAGATTTTGCAATGGGATGTGACATTTCAAGGACAAGTAGTAGACCATGCACTGGATACAGTGGGTTCAACATCAATTAGCATGACATTGTACAACACCACGTTCTGCTTCGTTTGCACCCACTTGGCCTCTGGAGAGAAATATGGTGACGAGTTGAGAAGAAACTTGGACGTCTCTGAAATCTTGAAGAAAACTAAATTTTGTCACTCGTTTAAGTCTCTTCCAGAAAGCATACTGGAACATGATAATATTATTTGGCTTGGGGATTTGAATTATCGGCTTTTGAGGATAGAGCAGAGAGCTGGTCGAGTATTTGAAGGTTGGAAGGAAGGGAGCATATACTTTGCTCCTACTTACAAATATTTGACCAATTCTGACCACTATGTTGCACAAACCTCCAAATCCAAAGATAAACGACGAACACCTGCTTGGTGTGATAGAATTCTGTGGAAAGGGGAAGGGGTGAATCAGATGTGGTATGTTCGAGGAGAGTCGAAATTCTCAGACCACAGGCCTGTGTGTTCACTATTCTCGGTTGAAGTAGACTTGAGAAGCAAAAGTGGTGCAAATTGTATCTCCAGGTCTACGTTGTCATCGACTTGTTGCGCTGCTAAAGTTCAGGCTGAAGAGCAACTCTTGTTAATAACGAGATCACAAAATTGCATAGAAACCACACCCAATTTCTGA 1407 0.4399 MRTDSKKSSKSSWPKLAVRKWLNMKSSAETFHSEYCVTGTERRKSCSDKDSYVVVSGWLKDSTNGMKRSVLGKKSTPVSDALDFRMFVGTWNVGGKSPNEGLDLRNWLTSPSPADIYVIGFQEIVPLNAGNVLGPEDSGPAVKWLTLIREALNTNNKYHDHNDTMTNNNTSEHDREGNLKPRPSFSEFLSSENGERFCLVASKQMVGIFLSVWVRADLCNHVSNLKVSCVGRGIMGYLGNKILQWDVTFQGQVVDHALDTVGSTSISMTLYNTTFCFVCTHLASGEKYGDELRRNLDVSEILKKTKFCHSFKSLPESILEHDNIIWLGDLNYRLLRIEQRAGRVFEGWKEGSIYFAPTYKYLTNSDHYVAQTSKSKDKRRTPAWCDRILWKGEGVNQMWYVRGESKFSDHRPVCSLFSVEVDLRSKSGANCISRSTLSSTCCAAKVQAEEQLLLITRSQNCIETTPNF. 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04525 468 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 18 334 IPR045849 GO:0004445
Seca2g04525 468 Pfam Endonuclease/Exonuclease/phosphatase family 89 410 IPR005135 GO:0003824
Seca2g04525 468 MobiDBLite consensus disorder prediction 166 181 - -
Seca2g04525 468 Gene3D Endonuclease/exonuclease/phosphatase 336 445 IPR036691 -
Seca2g04525 468 Gene3D Endonuclease/exonuclease/phosphatase 61 335 IPR036691 -
Seca2g04525 468 SMART i5p_5 82 425 IPR000300 GO:0016791|GO:0046856
Seca2g04525 468 MobiDBLite consensus disorder prediction 158 182 - -
Seca2g04525 468 SUPERFAMILY DNase I-like 65 422 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04525 Seca-Chr2 131004592 131010826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04525 68 421 Acyl Lipid Metabolism Gene Families AT1G65580 25.463 4.12e-25 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04525 - - gmx:100800223 638.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04525 2 131004592 131010826 Seca2g04525 2 131004592 131010826 ECH
Seca8g05484 8 146097183 146102483 Seca2g04525 2 131004592 131010826 PCT