Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04324 ATGGCAACCATCATTGCTGGTACCCCAACATCATCGATCGCCCGCGCAGGTCTTGTGCAAAAGCGACCTCTTGGGGTCTCGATCTCATCCTCTACCGTTCTTGGATTGCCAGCAATGGCCAAGGTGGGAAGAGTAAGGTGCTCCATGGAGGAAAAGCCTTGTGTGCAGGAAAGCAGCTCAAACATTGGGATGGGGGCATCCTTGATAGCAGCTGTTTGCGCTGCAACCATGTCAAGCCCAGCCATGGCTTTGGTTGATGAGAGAATGAGCACTGAAGGAACAGGACTTCCATTTGGGCTCAGCAACAACCTTCTCGGTTGGATCCTGTTTGGTGTCTTTGGTCTTATATGGTCTCTCTATACTGTCTACACTTCCACGCTTGACGAGGATGAAGAGTCTGGATTGTCCCTCTAA 414 0.5097 MATIIAGTPTSSIARAGLVQKRPLGVSISSSTVLGLPAMAKVGRVRCSMEEKPCVQESSSNIGMGASLIAAVCAATMSSPAMALVDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWSLYTVYTSTLDEDEESGLSL. 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04324 137 PANTHER PHOTOSYSTEM II REACTION CENTER W PROTEIN, CHLOROPLASTIC 1 137 IPR009806 GO:0009507|GO:0009523|GO:0015979
Seca2g04324 137 Pfam Photosystem II reaction centre W protein (PsbW) 1 137 IPR009806 GO:0009507|GO:0009523|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04324 Seca-Chr2 127933137 127933998 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04324 K02721 - gmx:100306223 217.238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04324 2 127933137 127933998 Seca2g04324 2 127933137 127933998 ECH
Seca8g05709 8 148941427 148942397 Seca2g04324 2 127933137 127933998 PCT