Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04136 ATGATGGTCAAAGCAATCCAACTTCAGCTATGTGGGTTGGTTAGCCAACGCTGGAGTTGGAAACCTCGCTCTTCCCTTTCAATCTCATCCTTCTCTTCACTCTCCCCAATTCCATACCCTAACCCTTATTTCAAGCTCCTTCCCTCCAACACCATCTCTCACACGCCTCGATCGGCACCGTTTCGCGCTTCCTCATCGCTTCCATCTGTCGGAAATGTTCGAAGCATCAAGTTCTGCCAGTGGTGTGGTGGTTCGACGAAGTATGATATACCTGATGGAGAAGAAAAGTTGAGAGCCATATGTACAATTTGTGGGAAGATTGCCTATCAGAATCCTAAAATGGTAGTTGGTTGCCTCGTCGAAGATGATAACAAGGTCCTCCTTTGCAAGAGAAGTATTCAACCATCTCATGGCCTCTGGACACTTCCTGCTGGTTATTTGGAAATTGGAGAGTCGGCTGTGGAAGGAGCCATTAGGGAAACAAGGGAGGAAGCTAATGCAGATGTAGAAGTAATTTCCCCCTTTGCCCAATTGGATATTCCTTTAATTGGCCAAACTTATATGATATTTTTAGCAAAGCTGAAGAAGCCCCATTTTTCACCTGGTCCAGAATCATCAGAATGCCAACTTTTTCCACTTGATGATATACCTTTCAATTCTCTATCCTTTTCATCAATGGTGGTTACCTTAAGTTTGGTATGA 702 0.4416 MMVKAIQLQLCGLVSQRWSWKPRSSLSISSFSSLSPIPYPNPYFKLLPSNTISHTPRSAPFRASSSLPSVGNVRSIKFCQWCGGSTKYDIPDGEEKLRAICTICGKIAYQNPKMVVGCLVEDDNKVLLCKRSIQPSHGLWTLPAGYLEIGESAVEGAIRETREEANADVEVISPFAQLDIPLIGQTYMIFLAKLKKPHFSPGPESSECQLFPLDDIPFNSLSFSSMVVTLSLV. 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04136 233 ProSiteProfiles Nudix hydrolase domain profile. 111 233 IPR000086 -
Seca2g04136 233 ProSitePatterns Nudix box signature. 145 166 IPR020084 GO:0016787
Seca2g04136 233 PANTHER NUDIX HYDROLASE 23 78 231 - -
Seca2g04136 233 SUPERFAMILY Nudix 77 218 IPR015797 -
Seca2g04136 233 Pfam NUDIX domain 115 216 IPR000086 -
Seca2g04136 233 Gene3D - 75 110 - -
Seca2g04136 233 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 111 233 - -
Seca2g04136 233 Pfam Nudix N-terminal 77 110 IPR029401 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04136 Seca-Chr2 124753804 124757617 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04136 K18453 - gmx:100783108 403.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04136 2 124753804 124757617 Seca2g04136 2 124753804 124757617 ECH
Seca8g04960 8 137688560 137690683 Seca2g04136 2 124753804 124757617 PCT