Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03524 ATGGGAAGAAATCTCAGCCCGGTAGTGCGCCGGGAGCTGGCAAATCTTGACAAAGATGAAGATAGTCGAAAATCCGCCATGAAAGCATTGAAGTCATATGTGAAAGATTTGGATTTTAAGGCCATTCCTGTGTTTCTCGCAAAAGTTTCTGAGACAAAGGAAAATGGTTCTTTATCTGGTGAATTCACAATTTCACTGTATGAAGTTCTTGCCCGGGTTCATGGTGTCAAAATTGTTCCCTTGATAGACAGCATCATGGAATCCATAGTTCAAACCTTAGGTTCAAGTGCAGGGTCCTTCCCTCTTCATCAGGCTTGCTCAAAGGTGGTCCCAGCAATTGCAAGACATGGAATTGACCCTACAACCCCAGAAGAGGATAAGAGGCACATAATTCATTCCCTTTGCAAGCCTCTTTCTGATTCACTCTCAATTTCTCAGGAGAGCCTAGCTTCTGGGGCAGCCCTTTGCTTGAAGGCTCTGGTGGATTCAGATAATTGGAGGTTTGCTTCTGATGAAATGGTCAATAGGGTTTGCCAGAATGTGGCTGTGGCATTAGAAGGAAAGTCCAGTCAAACCAATTCACACATGGGTCTAGTTATGTCTCTGGCCAAGCGAAATGCTTTGATTGTTGAAGCCTATGCAAGGTTGCTCATACAATCTGGACTAAGAATATTGAATTCTGGCCTTGTGGAGGGGAATTCTCAGAAGCGGTTCTCAGCCATTCAGATGATCAACTTCTTGATGAAATGTTTGGACCCCAGAAGTATATTCTCAGAGCTTGATTTGATAATTGAGGAGATGGAGAAGTGTCAATCTGATAAAATGCCATTTATCAAAGGTGCAGCATTTGAAGCTTTGCAAACTGCCAAGAGAATTACAATTGACAAAAAGCCAAGATATGTAAAAAGAGCTGCTTCTGTGACAGGGTCAAATTTCAGTAAGGGAGAGAATATTTCTGGTGATGGAAACCATTCTCCTGCATCTGTTTCACCAGAATCACGCACATTGGACTTTTTGCCTGGATATGAATCTGTTGTTGAGTCTCCCATGTCAACCAACTTAGACTATGAACAAAGGTGTGTGAATAGGAAGCTTTGGAGTAAAGAAAATGGAGGGGTTGATGTGTCTCTCAAGGATGGTTTGTCAGCAGAGGTAGGGCTAGAAAGTGCTTTGCTAGAGCACTCTATTTGTCATGAGTATTCTAATGGAAGGAGAGATTTTGCAGAAGAGTTTTCTGGTTTCATGGACAGAAATCCTAGGCATGGAGTTTCCAGAAGTATCCCCAATAGTCCTCAAAACATCACTTCTTGTTTACTTATTGAGTTGGCATTCTTTACTATTGTAAATCAGAAATCACGCACACAGGTCACAATTGACAGCATTCAAATCTTTGAGACCCCAAGGAAGCTCATTCACTCTCTTCAAGATCCTAATGATCTGACTTTGGATTTCACTGAGAAACAGAATAGAAGGTTCAAGAGTGTATCCTCATGCAACATGAAGTGGAGTCCAATATCTAAATATGTGAAGTGTGATTGTGGAGTAAATGAAAGTTTATGTGAGTTTGAAGACAATTCAGAGTCAGTGTCATCAACAGATGACCCTCTTGGAGGAGATGCTGATATGCAGATGCCTGCCAAGGTGGTTCCAAAAAGTAGAAATCTTATAGAAAATGATCGCATGGAAAAAACACTTCAAAAGGCTAAATTTAAATTGGTTTTTGGTCTTTCATTTGTTCTTCTCGCTATGGCTACACCTTTACTCTGGATCAATAGTCAGGATGAAGGCCATTATCTTGTGCCAACATAA 1809 0.4118 MGRNLSPVVRRELANLDKDEDSRKSAMKALKSYVKDLDFKAIPVFLAKVSETKENGSLSGEFTISLYEVLARVHGVKIVPLIDSIMESIVQTLGSSAGSFPLHQACSKVVPAIARHGIDPTTPEEDKRHIIHSLCKPLSDSLSISQESLASGAALCLKALVDSDNWRFASDEMVNRVCQNVAVALEGKSSQTNSHMGLVMSLAKRNALIVEAYARLLIQSGLRILNSGLVEGNSQKRFSAIQMINFLMKCLDPRSIFSELDLIIEEMEKCQSDKMPFIKGAAFEALQTAKRITIDKKPRYVKRAASVTGSNFSKGENISGDGNHSPASVSPESRTLDFLPGYESVVESPMSTNLDYEQRCVNRKLWSKENGGVDVSLKDGLSAEVGLESALLEHSICHEYSNGRRDFAEEFSGFMDRNPRHGVSRSIPNSPQNITSCLLIELAFFTIVNQKSRTQVTIDSIQIFETPRKLIHSLQDPNDLTLDFTEKQNRRFKSVSSCNMKWSPISKYVKCDCGVNESLCEFEDNSESVSSTDDPLGGDADMQMPAKVVPKSRNLIENDRMEKTLQKAKFKLVFGLSFVLLAMATPLLWINSQDEGHYLVPT. 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03524 602 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 3 334 IPR033337 GO:0005874|GO:0008017
Seca2g03524 602 MobiDBLite consensus disorder prediction 312 332 - -
Seca2g03524 602 FunFam protein SINE1 isoform X1 2 314 - -
Seca2g03524 602 MobiDBLite consensus disorder prediction 312 333 - -
Seca2g03524 602 Gene3D - 4 317 IPR011989 -
Seca2g03524 602 SUPERFAMILY ARM repeat 13 287 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03524 Seca-Chr2 109404795 109406798 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03524 - - gmx:102659858 809.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g02154 10 24643080 24646911 Seca2g03524 2 109404795 109406798 PCT