Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02154 ATGGGAAGGAGTCTGAGTCCAGTGCTACAACGAGAGCTTCAAAATCTTGACAAAGATGCAGATAGTCGCAAATCTGCAATGAGGGCATTGAAATCGTATGTGAAAGATTTGGACTATAAAACAATTCCTATCTTTCTTGCACAAGTTTCTGAGACCAAGGAAACTGGTACTTTGTCTGGAGAATTCACAATTTCACTGTATGAAGTTCTTGCTCGGGTTCATGGAGTCAAGATTGTTCCCATGATAGACAGTATTATGCAATCCATTGTTCAGACCTTAGCTTCAAGTGCAGGGTCTTTCCCTCTTCAGCAAGCTTGCTCAAAGGTGGTTCCAGCTGTAGCAAGATATGGAATTGACCCCACAACCCCAGAAGAGAAGAGGAGGCATACAATTCATTCTATTTGTAAGCCTCTTTCTGATTCTCTCTCAAGCTCTCAAGAGAGTTTGAGTTGCGGGGCAGCACTTTGCCTGAAGGCTCTTGTGGATTCAGATAACTGGCGGTTTGCTTCAGATGAAATGGTCAACAGGGTTTGCCAGAATGTTGCTGTGGCCTTAGAGGGAAAATCCACTCAGACCAATTCACACATGGGTCTGGTTATGGCCTTAGCCAAGCGTAATGCTTTGATTGTTGAAGCCTATGCTAGATTGCTCATACAATCTGGGCTGCGAATACTAAATGCTGATGGTGAGCTTTTGGAGGGGAATTCTCAGAAGCGATTTGCAGCCATTCAAATGGTGAACTTCTTGATGAAATGTTTAGATCCCAGGAGCATTTTCTCTGAGGTTGAGGAGATAATTGAGATGATGGAGCTGTGTCAATCTGACAAAATGGCATATGTCAAAGGTGCTGCATTTGAAGCTTTGCAATCTGCTAAGAGAATTGCCATTGACAAAAAATCCAGATGTGTAAAGAGTCCTGCTTCAGTGACAGGGTCAAATTTTAGCAGGAGAGACTATATGGAGGGAGAAAGTTTTTCTGGTGATGGAGACCATTCTCCTGCATCTATGTCACCAGAGTCACGTACCTTAGATTTTTTCCCTGGATATGAATCCCTTGTTGAGTCTCCCATTTCAACAAATCAGCCTTCTCAGAACTTGAACTATACAAGAAGGAGTATAAATAGGAAGCTTTGGAGTCATGAAAATGGAGGGGTTGATGTGTCTCTCAAGGATGGTTTGTTCTCGAAGTCAGGGCAGGGAAATGCCTTGTTTGAGCACACTGTGGATCACGAGTTTTCCAATGGAGGGGGAGATTTAACAGAGGAATTTGCTGGTTTCATGCACAGAAATCCTAGGCATGGAGTATCCAAAAGTACCAACACAAGTCCCCTAAGATCACGCACACCGGTTAATGTTGACAGCATTAAAATCTTTACAACCCCTAGGAAGCTCATTCACTCTCTTCAAGACCCAGATGATGAGACTTCAGATTACTCTGAGAAACAGAATAGAAGGTTCAGGAGTCTATCATCAGGCAATATTGAGTGGAGCCCAGCTTCTTATTCTAAATATGACCAGAATGGGGCTGCAGATCATGGCAACTATGATCCTAAAGAGAATGAAAGCTCGTGTGATGATGTGCAGTTTCAAGGTGGACAGGAGTCTGTCTCATCAACTGATGACCTTCCTGTTGGTGATGCTGATATGCAGAGGCCTCCTGAAAGTAGAGATGATACTCAAACTGTTCTCATGAAAAAGCCTCTTCAAAAGGCTAAACGTAAATTTGTCTGTGGCCTTTCTTTTGTTCTTCTTGCAATGGCTACACCCTTGCTCTGGATTAACAGTCAGGAAGAAGGCCACTTTCTTGTCCCAACATAA 1818 0.4312 MGRSLSPVLQRELQNLDKDADSRKSAMRALKSYVKDLDYKTIPIFLAQVSETKETGTLSGEFTISLYEVLARVHGVKIVPMIDSIMQSIVQTLASSAGSFPLQQACSKVVPAVARYGIDPTTPEEKRRHTIHSICKPLSDSLSSSQESLSCGAALCLKALVDSDNWRFASDEMVNRVCQNVAVALEGKSTQTNSHMGLVMALAKRNALIVEAYARLLIQSGLRILNADGELLEGNSQKRFAAIQMVNFLMKCLDPRSIFSEVEEIIEMMELCQSDKMAYVKGAAFEALQSAKRIAIDKKSRCVKSPASVTGSNFSRRDYMEGESFSGDGDHSPASMSPESRTLDFFPGYESLVESPISTNQPSQNLNYTRRSINRKLWSHENGGVDVSLKDGLFSKSGQGNALFEHTVDHEFSNGGGDLTEEFAGFMHRNPRHGVSKSTNTSPLRSRTPVNVDSIKIFTTPRKLIHSLQDPDDETSDYSEKQNRRFRSLSSGNIEWSPASYSKYDQNGAADHGNYDPKENESSCDDVQFQGGQESVSSTDDLPVGDADMQRPPESRDDTQTVLMKKPLQKAKRKFVCGLSFVLLAMATPLLWINSQEEGHFLVPT. 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02154 605 Gene3D - 3 298 IPR011989 -
Seca10g02154 605 MobiDBLite consensus disorder prediction 466 484 - -
Seca10g02154 605 FunFam protein SINE1 isoform X1 2 316 - -
Seca10g02154 605 MobiDBLite consensus disorder prediction 524 540 - -
Seca10g02154 605 MobiDBLite consensus disorder prediction 485 504 - -
Seca10g02154 605 MobiDBLite consensus disorder prediction 320 340 - -
Seca10g02154 605 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 3 519 IPR033337 GO:0005874|GO:0008017
Seca10g02154 605 MobiDBLite consensus disorder prediction 466 560 - -
Seca10g02154 605 SUPERFAMILY ARM repeat 11 289 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02154 Seca-Chr10 24643080 24646911 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02154 - - cam:101511812 957.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g02154 10 24643080 24646911 Seca10g02154 10 24643080 24646911 ECH
Seca10g02154 10 24643080 24646911 Seca2g03524 2 109404795 109406798 PCT