Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03388 ATGAACGCAGATCCGACCCGCTTTCGCTCCGGCCCGAATTCTTTCTTCCCTTCAGAGGGTTTTGCTACTGAGACGCTGATCCACCCAAAAGAAAACAGCATTATTCCTGATATTCCAGCAACTATTGCAGCTGTTAAAAACCCTTCGTCTAAGATTATATATGATGAACACAATCATGAACGATTTCCTCCAGGTGACCCCAGCAAGAGGGCATTTGCCTACTTTGTCCTAACAGGTGGTAGGTTTGTTTATGCCTCTCTGGTCCGTCTCCTTGTCCTCAAGTTTGTGCTCAGCATGTCAGCAAGTAAGGATGTTCTTGCTCTGGCTTCACTTGAAGTTGATCTCTCCAGCATTGAGCCAGGCACCACTGTAACTGTTAAGTGGCGTGGAAAGCCAGTATTTATCAGGCGTAGAACAGAAGAGGATATTAATCTGGCAAACAGTGTTGATGTTGGATCTCTTCGTCATCCCCAGCCGGATTCAGAGAGAGTCAAGGACCCAGAATGGCTCATTGTGATTGGGGTTTGTACACATCTGGGTTGCATTCCCCTGCCAAATGCAGGTGACTTTGGTGGATGGTTTTGCCCATGCCATGGTTCACATTATGATATATCTGGCAGAATTAGGAAGGGACCAGCACCATTCAATCTGGAGGTACCAACTTATACATTCTTGGATGAAAACAAGTTGATGATTGGTTAA 702 0.4573 MNADPTRFRSGPNSFFPSEGFATETLIHPKENSIIPDIPATIAAVKNPSSKIIYDEHNHERFPPGDPSKRAFAYFVLTGGRFVYASLVRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDINLANSVDVGSLRHPQPDSERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPTYTFLDENKLMIG. 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03388 233 NCBIfam ubiquinol-cytochrome c reductase iron-sulfur subunit 83 233 IPR006317 GO:0008121
Seca2g03388 233 SUPERFAMILY ISP domain 95 230 IPR036922 GO:0051537
Seca2g03388 233 PANTHER CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL 41 233 IPR014349 GO:0051537
Seca2g03388 233 FunFam Cytochrome b-c1 complex subunit Rieske, mitochondrial 103 233 - -
Seca2g03388 233 Gene3D - 102 233 IPR036922 GO:0051537
Seca2g03388 233 PRINTS Rieske 2Fe-2S subunit signature 205 217 IPR005805 GO:0016020|GO:0051537
Seca2g03388 233 PRINTS Rieske 2Fe-2S subunit signature 193 205 IPR005805 GO:0016020|GO:0051537
Seca2g03388 233 PRINTS Rieske 2Fe-2S subunit signature 171 182 IPR005805 GO:0016020|GO:0051537
Seca2g03388 233 Pfam Rieske [2Fe-2S] domain 116 218 IPR017941 GO:0051537
Seca2g03388 233 SUPERFAMILY ISP transmembrane anchor 50 106 - -
Seca2g03388 233 CDD Rieske_cytochrome_bc1 110 233 - -
Seca2g03388 233 Pfam Ubiquinol cytochrome reductase transmembrane region 62 104 IPR004192 GO:0008121
Seca2g03388 233 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 163 231 IPR017941 GO:0051537
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03388 Seca-Chr2 104616372 104619115 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03388 K00411 - gmx:100806917 422.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g05025 10 115737361 115745593 Seca2g03388 2 104616372 104619115 PCT