Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03150 ATGGGGCTCAAGAACACAATTTTCTTGGCACTAGTTGTTGCTTTGATCATGAAGGAGGCCTTGGCAGAACAACATGTAGTTGGTGGAAGCCAAGGTTGGGATGAATCCACAGACTTTAACTCTTGGGTTTCAGGCCAAACATTTAAAGTTGGGGATCAACTTGTTTTCAAGTACTCTTCTGGGTTGCATAGTGTGGTTGAACTAGGCAGTGAGAGTGACTACAAGAATTGTGATCTTGGCAGTGCAGTGAACTCCATGAGTAGTGGCAATGATGCTGTAAAACTGAACAAACCAGGTACACGGTACTTTGCCTGTGGTACCTTGGGCCATTGCAGTCAAGGAATGAAGGTGAAGATTACAACAGTGTCTGGGAATGCACCTTCTACCCCTGCATCATCATCATCATCTTCAACTACTTCTTCTGCATCTTCAGCCTCACAAGGCCTCATCTCTCTTATGCTCATTGTTGCATTGTTGATTGCCTCTCTGCTTCCCAAGTTTTGA 504 0.4464 MGLKNTIFLALVVALIMKEALAEQHVVGGSQGWDESTDFNSWVSGQTFKVGDQLVFKYSSGLHSVVELGSESDYKNCDLGSAVNSMSSGNDAVKLNKPGTRYFACGTLGHCSQGMKVKITTVSGNAPSTPASSSSSSTTSSASSASQGLISLMLIVALLIASLLPKF. 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03150 167 SUPERFAMILY Cupredoxins 22 121 IPR008972 -
Seca2g03150 167 ProSiteProfiles Phytocyanin domain profile. 23 123 IPR003245 GO:0009055
Seca2g03150 167 PANTHER BLUE COPPER PROTEIN 22 134 IPR039391 GO:0009055
Seca2g03150 167 CDD Phytocyanin 24 120 - -
Seca2g03150 167 Gene3D - 21 127 IPR008972 -
Seca2g03150 167 FunFam Blue copper 21 127 - -
Seca2g03150 167 Pfam Plastocyanin-like domain 34 115 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03150 Seca-Chr2 95158439 95159730 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03150 15 122 Miscellaneous Gene Families AT3G27200 71.296 2.09e-55 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03150 - - aprc:113863608 252.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g03150 2 95158439 95159730 Seca2g03150 2 95158439 95159730 ECH
Seca10g02284 10 26674580 26676271 Seca2g03150 2 95158439 95159730 PCT