Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02284 ATGCATCCACAGACTTTAACTCATGGATTTCAGGCCAAACATTCAAGGTTGGAGATCAACTTGGTTTTCAAGTACTCTTCTTTGCATAGTGTGGTTGAACTAGGTAGTGAGAGTGCCTACAAGAATTGTGATATTAGCAGTCCAGTTAAATCCTTAAGCAGTGGCAAAGATGTTGTCAAATTGGACAAGCCAGGTACCAGGTACTTCACTTGTGGTACCTTTGGTCACTGTGGTCAAGGCATGAAGGTCAAGATTAAAATAGTGAAAGGGGATGCATCTTCTTCCCCTGCATCATCACCATCACCATTATCATCATCATCGTCATCATCAGTATCACCATCATCATCTCCATCAGTTGCAGCTTCTTCTTCTACTACTACTACTGCTACTTCTCATGCATCTTCAGTCCCACAATGCTTTGCCTCTTTTGTGCTCATTGTTGCATTATCTGTTACCACAGTGCTTTCCCTGTTTTAA 477 0.4172 MHPQTLTHGFQAKHSRLEINLVFKYSSLHSVVELGSESAYKNCDISSPVKSLSSGKDVVKLDKPGTRYFTCGTFGHCGQGMKVKIKIVKGDASSSPASSPSPLSSSSSSSVSPSSSPSVAASSSTTTTATSHASSVPQCFASFVLIVALSVTTVLSLF. 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02284 158 MobiDBLite consensus disorder prediction 91 123 - -
Seca10g02284 158 Pfam Plastocyanin-like domain 16 81 IPR003245 GO:0009055
Seca10g02284 158 Gene3D - 3 94 IPR008972 -
Seca10g02284 158 SUPERFAMILY Cupredoxins 21 87 IPR008972 -
Seca10g02284 158 ProSiteProfiles Phytocyanin domain profile. 1 89 IPR003245 GO:0009055
Seca10g02284 158 PANTHER BLUE COPPER PROTEIN 20 114 IPR039391 GO:0009055
Seca10g02284 158 MobiDBLite consensus disorder prediction 92 123 - -
Seca10g02284 158 CDD Phytocyanin 20 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02284 Seca-Chr10 26674580 26676271 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02284 20 88 Miscellaneous Gene Families AT3G27200 71.014 6.75e-33 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02284 - - gmx:100306337 152.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g02284 10 26674580 26676271 Seca2g03150 2 95158439 95159730 PCT